Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2351 ATGGAAACAAACACAGGTGAGGGAAAGAGGAGCTTGAAGCACTACAAGGAGGAGGAGGAGGAGGAAGAAGAGGAAGATGAAGAGGTGAGTGAGACAGGTTTTGGAGAGGATGGAAGAAGGAAGAGGGTGATGACAGATCTCCACAGCAAGAGAGGGTCGTCCTCCAAAGCTGGAAGCTCAATGCCACCTTCTTGTCAGGTGGTTGGTTGTGACACTGATCTGAGTGAGGCTAAGCCGTACCACCGGAGGCACAAGGTCTGTGAGAACCATGCCAAGGCTCCTTCCGTACTCATTGCTGGGTTGCACCAACGCTTTTGCCAGCAATGTAGCAGGTTTCACGAGGTATCAGAGTTTGATGACACGAAAAAGAGTTGTAGAAGGCGTTTGGCTGGACATAATGAGAGGCGTCGAAAAAGTGCACCTAATTATCATGGAGAAGGATTTAATTAA 450 0.4889 METNTGEGKRSLKHYKEEEEEEEEEDEEVSETGFGEDGRRKRVMTDLHSKRGSSSKAGSSMPPSCQVVGCDTDLSEAKPYHRRHKVCENHAKAPSVLIAGLHQRFCQQCSRFHEVSEFDDTKKSCRRRLAGHNERRRKSAPNYHGEGFN 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2351 149 MobiDBLite consensus disorder prediction 33 49 - -
Glsi11g2351 149 MobiDBLite consensus disorder prediction 1 17 - -
Glsi11g2351 149 Gene3D - 55 126 IPR036893 GO:0003677|GO:0005634
Glsi11g2351 149 MobiDBLite consensus disorder prediction 18 32 - -
Glsi11g2351 149 SUPERFAMILY SBT domain 63 143 IPR036893 GO:0003677|GO:0005634
Glsi11g2351 149 FunFam Squamosa promoter-binding-like protein 14 55 126 - -
Glsi11g2351 149 Coils Coil 12 32 - -
Glsi11g2351 149 PIRSF SBP 6 149 IPR017238 GO:0003677|GO:0003700|GO:0009908
Glsi11g2351 149 ProSiteProfiles Zinc finger SBP-type profile. 62 139 IPR004333 GO:0003677
Glsi11g2351 149 MobiDBLite consensus disorder prediction 1 65 - -
Glsi11g2351 149 Pfam SBP domain 65 138 IPR004333 GO:0003677
Glsi11g2351 149 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 14 140 IPR044817 GO:0003677
Glsi11g2351 149 MobiDBLite consensus disorder prediction 50 65 - -
Glsi11g2351 149 MobiDBLite consensus disorder prediction 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2351 Glsi-ChrGlsi11 16458774 16459736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2351 58 142 SBP-box Gene Family AT2G33810 68.235 2.36e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Glsi11g2351 SBP 7.6e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2351 11 16458774 16459736 Glsi11g2351 11 16458774 16459736 ECH
Glsi14g1032 14 11435660 11436694 Glsi11g2351 11 16458774 16459736 ECH