Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2350 ATGGGGGAGAGTTCAACTTCAGGTTACAAGGAATATGTGGCCGGGTTGATCGCTGGGGTTGCCACTGTAGCTACGGGCCATCCATTTGACACAGTAAAGGTGAAGCTGCAAAAACACAATACCGAAGCCCATATGGTTCAATATAGGAGTGGTTTGCATTGCACTGCCAGGATACTGAAGACTGAGGGAATTAGAGGACTTTATAGTGGAGCAACCTCATCGTTTATTGGGATGGCTTTTGAAAGCTCACTTCTTTTTGGCATTTATTCCCAGACAAAACTAGCCCTCCAGGGTGGTGTGCAAAGTAGTTTACCGCAGCCTCAAGTAATAATACCATCTGCAGCTTATGGTGGTGCCATCATCAGCTTTGTGTTATGTCCATCAGAGCTTGTGAAGTGTAGGATGCAGATCCAAGGCACTGACTCTTTGGTTCCCAAGTCCAGTAGATACAGTAGTCCTCTCGATTGTGCCCTTAAAACTCTACAAAATGAAGGGGTGGCAGGAATCTTTCGTGGAGGTTGCACAACATTGCTTAGAGAATCTATAGGAAATGCTATGTTTTTTAGTGTGTATGAATATGTGCGTTATCACATGCGTTCACATGTTAAAGAAGCCTCGTCCAATTACAGCAACTTGATTGACATGGGAATTGGGATCATTACTGGTGGCCTTGGTGGTGTAGCTTTTTGGTTGGCTGTTTTGCCCCTGGACGTGGCAAAAACCATAATTCAGACTAACCCTGACAAAAACTGTACAAGGAATCCTTTTCAAGTCTTGAGTTCTATTTACAGGAGGGCTGGATTAAAGGGGTGCTATACAGGTCTGGGTCCTACGGTAGCTCGAGCATTTCCTGCTAATGCCGCAGCAATTGTCACCTGGGAGCTAGCAATGAAAATGTTAGGTATTAAGCATGACTAA 918 0.4466 MGESSTSGYKEYVAGLIAGVATVATGHPFDTVKVKLQKHNTEAHMVQYRSGLHCTARILKTEGIRGLYSGATSSFIGMAFESSLLFGIYSQTKLALQGGVQSSLPQPQVIIPSAAYGGAIISFVLCPSELVKCRMQIQGTDSLVPKSSRYSSPLDCALKTLQNEGVAGIFRGGCTTLLRESIGNAMFFSVYEYVRYHMRSHVKEASSNYSNLIDMGIGIITGGLGGVAFWLAVLPLDVAKTIIQTNPDKNCTRNPFQVLSSIYRRAGLKGCYTGLGPTVARAFPANAAAIVTWELAMKMLGIKHD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2350 305 Gene3D Mitochondrial carrier domain 113 305 IPR023395 -
Glsi11g2350 305 FunFam Mitochondrial carrier protein 109 304 - -
Glsi11g2350 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Glsi11g2350 305 Pfam Mitochondrial carrier protein 219 301 IPR018108 -
Glsi11g2350 305 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Glsi11g2350 305 Pfam Mitochondrial carrier protein 8 97 IPR018108 -
Glsi11g2350 305 FunFam Mitochondrial carrier protein 1 108 - -
Glsi11g2350 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 300 - -
Glsi11g2350 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Glsi11g2350 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Glsi11g2350 305 SUPERFAMILY Mitochondrial carrier 7 294 IPR023395 -
Glsi11g2350 305 Gene3D Mitochondrial carrier domain 2 112 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2350 Glsi-ChrGlsi11 16452346 16457195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2350 5 300 Antiporters AT1G79900 31.922 1.53e-33 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2350 11 16452346 16457195 Glsi11g2350 11 16452346 16457195 ECH