Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2318 ATGAACCGCGGTGACCATATTGCTTATGATTTGGTCATGCTTAGCCTATCCATATCCCTCGTCGTTCTTGGTGTTGTCCTCTTTCTTGTCTGCAAGAAAAAACCAGTTGAATCAGAAGAAACACTCCCTGTGAAGATTTGTGCTCGTGCATACTCATTGATAGACATTGATGCTGCCACCGATGGCTTCAATCACCGAAGAACTGTAGGCAAGGGTCGCCTTGGAACTGTATATGCTGGTTTATTGGAAAGAGAAGAGGTCGTAGCTATTAAGCGGATTCATCCCCTGCTTGTTCTGAGCAATGCAGGATTTGGGTTCTCGTCAGTGTTAAAATGGCTCTCTTTAGCTCAACACCCCAATATAGTTCCCATTATAGGGTTCTCAGAAGCACCTGGTGAGAGAATTATAGTGATGGAGTTTGTTCGCCTAGTAAGCTTAGACTTCTATTTGCATCAAAACCCAAATGGGGCTTCTCTGTTGGACTGGAACCAGAGGTTCAGAATTGCAGCAGGAGCAGCCAGAGGACTTGAGTACCTACATGAAGGGATGGCACCAACCATTGTGCATGGCTGTGTCAAGTCCTCAAATATTCTAATCGATGTGAACTTCTGTGCTAGGATTTCTGATTATGGGCTTAACTTTTTGGCACCCAAAGAGAGGAGAGGCCTAGTAGGGCATGTGGATGATGAGTATTGGCATCAGAGAGAGATTGTTGCTTGCAAGGAAAGTGATGTTTATGGGTTAGGGGTGGTGGTGTTGGAGCTTTTAAGTGGAAGAAATTGTGAGGAAGGATTCCTAGCAAAATGGGCATTGCCTTTGATAAAGGAAATGAGATATACTGAACTTTTGGACCCAAGATTGGTGATTCCTTCTGACATGGAGCCTCTTATTAGATTAGCTAAAGTTGCTCTAGCTTGTGTGGGTAATTCAAGGAAATGTAGGCCTTCTATTGTTCAAGTAGCAACCATTTTGAACAATTTAGAGATTGAAGTATGCATCTGA 1002 0.4341 MNRGDHIAYDLVMLSLSISLVVLGVVLFLVCKKKPVESEETLPVKICARAYSLIDIDAATDGFNHRRTVGKGRLGTVYAGLLEREEVVAIKRIHPLLVLSNAGFGFSSVLKWLSLAQHPNIVPIIGFSEAPGERIIVMEFVRLVSLDFYLHQNPNGASLLDWNQRFRIAAGAARGLEYLHEGMAPTIVHGCVKSSNILIDVNFCARISDYGLNFLAPKERRGLVGHVDDEYWHQREIVACKESDVYGLGVVVLELLSGRNCEEGFLAKWALPLIKEMRYTELLDPRLVIPSDMEPLIRLAKVALACVGNSRKCRPSIVQVATILNNLEIEVCI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2318 333 FunFam serine/threonine-protein kinase-like protein ACR4 30 140 - -
Glsi11g2318 333 PANTHER OS01G0253100 PROTEIN 46 327 - -
Glsi11g2318 333 Pfam Protein tyrosine and serine/threonine kinase 66 322 IPR001245 GO:0004672|GO:0006468
Glsi11g2318 333 Gene3D Phosphorylase Kinase; domain 1 29 140 - -
Glsi11g2318 333 FunFam Receptor protein kinase CRINKLY4 141 331 - -
Glsi11g2318 333 Gene3D Transferase(Phosphotransferase) domain 1 144 331 - -
Glsi11g2318 333 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2318 333 SUPERFAMILY Protein kinase-like (PK-like) 39 324 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2318 Glsi-ChrGlsi11 16265430 16266431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2318 48 324 Receptor kinase-like Gene Family AT3G59420 39.175 1.94e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi11g2318 PK_Tyr_Ser-Thr 3.9e-24 CL0016