Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2309 ATGGATGTTAATCAAAGTCAAGGAGTAGAAGAGTTGTTCCAGGCTCAGGCTCATTTGTATAAGCACATATTCAACTTCATAAATTCTATGTGTCTTAAAAGTGCACTTGAGCTGGGCATACCAGACATAATATCCAGTCATGGCCAACCAATTACTCTCCCTGAGCTGGTCTTGGCACTTCAGATTGACCCGGCAAAATCTGGTTTTGTTTATAGGCTTATGCGCTTATTGGTGCACTCTGGCCTTTTTGCCACAACCAAAGTCCCCAAAGGTGAGAAGGAAGAAGACGGATATGATCTCACACCTTCTTCAAGGCTTCTCGTCAAAGACAATGTCCCCAACTTGACTCCTTGTGCTCAGGCAATTTTTCATCCTGCTCTGACAAATCCATGGCAATCATTGGGAGAATGGTTTCATAGAAATGAGATCAACCCTTTTCACACTACATTTGGGATGGATTTTTGGGAGTATGGAAGTCAAAACCCTGAGTATAGCAGACTCTTCAACGAAGGATTGGTTAGTGATTCTGGGATGATGAACTTGGTGATTAAAGACTGCAAAGCAGTTTTTGAGGGTTTGGACTCATTGGTTGATGTTGGAGGCGGCAAGGGAGGTGCTGCTACGATCATTTCTAAGGAAGTACCCAATATGAAATGCACAGTGCTAGATCTTCCTCATGTTGTTTCAGATATGCAAGATAGCGAAAATCTGAAATTTGTTGGAGGTGATATGTTTCATTTCATTCCTTCAGCAGACGCCATTCTTCTTAAGTTGGTTTTACATGCTTTCAGTGACGAGGACTGCGTGAAGGTATTGAAGAAGTGCAGAGAAGCTATTTCAAGCAAAGGCAAAGAAGGGAAAGTAATCATCATAGACATAGTGATAAATGAGAAGGAAGATACGCATGAACTGACAGAGCCAAAACTCTATCATGATTTATTGATGATGGTTTCAGTCACTGGAAGAGAAAGAGAGGAAAGAGAATGGGAGAAGCTCTTCTTAGAAGCAGGGTTCAGTCATTACAAGATAACACCCATGTTTGGTATAAGGTCGCTTATTGAAGTAGGACTATTCATCAGAAGAGAGGGATCTGCAAAAATGGATATCAATCAAGACCAGGTTGAGGCAGAGTTGTTTCAGGCTCAGTCCTATTTGTATAAGCATACATTCAATTTCATAGGGTCAATGTGTCTGAAAAGTGCAGTGCAGCTGGGCATACCAGACATAATTCACAGCCATAGCCAACCCATCACCCTCCCTGAGCTGCTCTTGGCACTTCAGATTGACCCTGCAAAATCAAGTCATGTATATAGGCTCATGCGCTTATTGGTGCACTCTGGCTTCTTTGTTTCTACCAAAGTTCCTAAAGGTGATAAGGAAGAAGAGGGATATGAGCTCACTCCTTCCTCTAGGCTGCTCCTCAAAGACAATGTCCTAACCTTGTCTCCGTTCGTTCAGGCAATGTTTCATCCAGCTTTAGTGCATCCATCAGAATTCTTGGGAGATTGGTTTCACAGAAATGAGCCCACACCCTTTCACACTGCACATGGGATTGGATTCTGGGACTATCTGAGCCAAAACCAAGAGTTCAACAGACTCTTCAATGATGCAATGATTAGTGATTCTAGTATGATGACCTTGGTAATTAAAGATTGCAAATCAGTTTTTGAGGGGTTCAGTTCTTTGGTTGATGTTGGGGGTGGTAAAGGAGCTGTGGCTAGGATCATTTCTGAGTCGTTGCCTAATCTGCAATGCAGTGTGCTAGATCTTCCACATGTTACTGAAAACCTGCAAGATAGCAATAATTTGAAATTTGTTGGAGGTGATATGTTTCGGTCTATTCCTCCAGCAGATGCCATTCTTCTTAAGTTGGTTTTACATGCTTATAGTGATGAAGACTGCGTGAAGGTACTCAAGAAGTGCAGGGAAGCAATTTCAAGCAAAGGCAAGGAAGGGAAAGTAATTATCATAGACATAGTGATAAATGAGAAGAATGATGAGCATGAACTGAAAGAAGCAAAGCTTTTCTTCGATCTGTTGATGATGGTTTTGGTCAGTGGAAGAGAAAGAGAGGAAAAAGAATGGGAGAAGCTCTTCCTGGAAGCTGGGTTCAGTCACTACAAGATAACACCCATCTTTGGTCTAAGGTCTCTTATTGAAGTTTATCCTTGA 2172 0.419 MDVNQSQGVEELFQAQAHLYKHIFNFINSMCLKSALELGIPDIISSHGQPITLPELVLALQIDPAKSGFVYRLMRLLVHSGLFATTKVPKGEKEEDGYDLTPSSRLLVKDNVPNLTPCAQAIFHPALTNPWQSLGEWFHRNEINPFHTTFGMDFWEYGSQNPEYSRLFNEGLVSDSGMMNLVIKDCKAVFEGLDSLVDVGGGKGGAATIISKEVPNMKCTVLDLPHVVSDMQDSENLKFVGGDMFHFIPSADAILLKLVLHAFSDEDCVKVLKKCREAISSKGKEGKVIIIDIVINEKEDTHELTEPKLYHDLLMMVSVTGREREEREWEKLFLEAGFSHYKITPMFGIRSLIEVGLFIRREGSAKMDINQDQVEAELFQAQSYLYKHTFNFIGSMCLKSAVQLGIPDIIHSHSQPITLPELLLALQIDPAKSSHVYRLMRLLVHSGFFVSTKVPKGDKEEEGYELTPSSRLLLKDNVLTLSPFVQAMFHPALVHPSEFLGDWFHRNEPTPFHTAHGIGFWDYLSQNQEFNRLFNDAMISDSSMMTLVIKDCKSVFEGFSSLVDVGGGKGAVARIISESLPNLQCSVLDLPHVTENLQDSNNLKFVGGDMFRSIPPADAILLKLVLHAYSDEDCVKVLKKCREAISSKGKEGKVIIIDIVINEKNDEHELKEAKLFFDLLMMVLVSGREREEKEWEKLFLEAGFSHYKITPIFGLRSLIEVYP 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2309 723 Gene3D - 2 107 IPR036388 -
Glsi11g2309 723 Gene3D - 367 473 IPR036388 -
Glsi11g2309 723 FunFam Coniferyl alcohol 9-O-methyltransferase 368 473 - -
Glsi11g2309 723 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Glsi11g2309 723 PANTHER O-METHYLTRANSFERASE 379 708 IPR016461 GO:0008168
Glsi11g2309 723 SUPERFAMILY "Winged helix" DNA-binding domain 374 477 IPR036390 -
Glsi11g2309 723 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 481 722 IPR029063 -
Glsi11g2309 723 Gene3D Vaccinia Virus protein VP39 108 356 IPR029063 -
Glsi11g2309 723 Gene3D Vaccinia Virus protein VP39 474 723 IPR029063 -
Glsi11g2309 723 Pfam Dimerisation domain 396 444 IPR012967 GO:0046983
Glsi11g2309 723 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Glsi11g2309 723 FunFam O-methyltransferase ZRP4 109 356 - -
Glsi11g2309 723 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 355 IPR029063 -
Glsi11g2309 723 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 386 723 IPR016461 GO:0008168
Glsi11g2309 723 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Glsi11g2309 723 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Glsi11g2309 723 FunFam O-methyltransferase ZRP4 475 723 - -
Glsi11g2309 723 Pfam O-methyltransferase domain 131 339 IPR001077 GO:0008171
Glsi11g2309 723 Pfam O-methyltransferase domain 500 705 IPR001077 GO:0008171
Glsi11g2309 723 CDD AdoMet_MTases 562 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2309 Glsi-ChrGlsi11 16157278 16160712 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2309 396 721 Monolignol Biosynthesis Gene Families AT5G54160 33.134 7.35e-45 163