Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2308 ATGGATGTTAATCAAATTCAAGGAGCAGAAGAGTTGTTCCAGGCTCAGGCTCATTTGTATAAGCACATATTCAACTTCATAAATTCTACGTGTCTTAAAAGTGCACTTGAGCTGGGCATACCAGACATAATATCCAGTCATGGCCAACCAATTACTCTCCCTGAGCTGGTCTTGGCACTTCAGATTGACCCGGCAAAATCTGGTTTTGTTTATAGGCTTATGCGCTTATTGGTGCACTCTGGCCTTTTTGCCACAACCAAAGTCCCCAAAGGTGAGAAGGAAGAAGAGGGATATGATCTCACACCTGCTTCAAGGCTTCTCGTCAAAGACAATGTCCCCAACTTGACTCCATATGCTCAGGCAATTTTTCATCCAGCTCTGACAAATCCATTGCAATCATTGGGAGAATGGTTTCATAGAAATGAGATCAACCCTTTTCACACTACATTTGGGATGGATTTTTGGGAGTATGGAAGTCAAAACCCTGAGTATAGCAGACTCTTCAACGAAGGATTGGTTAGTGATTCTGGGATGATGAACTTGGTGATTAAAGACTGCAAAGCAGTTTTTGAGGGTTTGAACTCATTGGTTGATGTTGGAGGCGGCAAGGGAGGTGCTGCTACGATCATTTCTAAGGAAGTACCCAATATGAAATGCACAGTGCTAGATCTTCCTCATGTTGTTTCAGATATGCAAGATAGCGAAAATCTGAAATTTGTTGGAGGTGATATGTTTCATTTCATTCCTTCAGCAGACGCCATTCTTCTTAAGTTGGTGTTACATGTTTTCGGTGACGAGGACTGCGTGAAGGTATTAAAGAAGTGCAGAGAAGCTATTTCAAGAAAAGGCAAAGAAGGGAAAGTAATCATCATAGACATAGTGATAAATGAGAAGGAAGATAAGCATGAACTGACAGAGCCAAAACTCTATTATGATTTATTGATGATGGTTTTAGTCACTGGAAGAGAAAGAGAGGAAAGAGAATGGGAGAAGCTCTTCTTAGAAGCAGGGTTCAGTCATTACAAGATAACACCCATGTTTGGTATAAGGTCGCTTATTGAAGTTTATCCTTGA 1074 0.4097 MDVNQIQGAEELFQAQAHLYKHIFNFINSTCLKSALELGIPDIISSHGQPITLPELVLALQIDPAKSGFVYRLMRLLVHSGLFATTKVPKGEKEEEGYDLTPASRLLVKDNVPNLTPYAQAIFHPALTNPLQSLGEWFHRNEINPFHTTFGMDFWEYGSQNPEYSRLFNEGLVSDSGMMNLVIKDCKAVFEGLNSLVDVGGGKGGAATIISKEVPNMKCTVLDLPHVVSDMQDSENLKFVGGDMFHFIPSADAILLKLVLHVFGDEDCVKVLKKCREAISRKGKEGKVIIIDIVINEKEDKHELTEPKLYYDLLMMVLVTGREREEREWEKLFLEAGFSHYKITPMFGIRSLIEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2308 357 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Glsi11g2308 357 Pfam O-methyltransferase domain 133 339 IPR001077 GO:0008171
Glsi11g2308 357 FunFam O-methyltransferase ZRP4 109 357 - -
Glsi11g2308 357 PANTHER O-METHYLTRANSFERASE 11 342 IPR016461 GO:0008168
Glsi11g2308 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Glsi11g2308 357 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Glsi11g2308 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Glsi11g2308 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Glsi11g2308 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Glsi11g2308 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Glsi11g2308 357 Gene3D - 2 107 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2308 Glsi-ChrGlsi11 16143967 16145451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2308 32 355 Monolignol Biosynthesis Gene Families AT5G54160 33.832 4.73e-49 167