Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2297 ATGGACCAAAAAATTAAAGTGGTTCTGCTTCTTCTTCTATTCCAAGCTCTGCTTGTAGCCGCCCAGATATCCTATCAGGACTTTATTGCCCTACAAGGTCTCACAGAATCTTGGGAGAACATACCACCGAGTTGGGTGGGTTTAGATCCTTGTGGCAGTAGCTGGGAAGGAATTCATTGCACCAATTCAAGGGTGACCTCAATAAAATTAGGAGGCATGAACTTGGTGGGCAAGCTCTCATCAGAAATACAGTCAATGTCTGAATTAGAGACCCTGGATCTCTCTTTCAACAAGGGCCTGGCAGGAACAATTCCAGAAGAAATTGGGAATTTGAGAAAGTTAAAAATCCTAATATTGGTTGGTTGTAATTTATTTGGTCCTATTCCAGAATCAATAGGATCTCTACAGCAGCTGACCTTTCTAGCTCTGAATTCTAATCGGTTCAGTGGAAACATTCCACGTACCATTGGCAATCTTTCCAATATTAATTGGCTAGATCTTGCTGATAACCAGCTTGAAGGACCTATCCCTGTCTCTGATGATGGTGATGATGAAGGACCTGGTCTTGACAAGCTGCTTAAGGCAAAACACTTTCACATAGGAAACAACAGGCTCTCGGGTGGAATTCCAGCTAAACTTTTTAGCCCAACAATGAGTCTGGTCCATGTGCTTTTTGATAGCAATCAACTAAGTGGCAGCATTCCTAGTACCCTTGGAAGTGTGAACTCATTGGAGGTGGTACGCTTTGATAGGAATCAATTAAGTGGGCAAGTGCCTTCAAACCTCAGCAATCTCAGAAATCTTAGCGAGCTGTATTTATCCAACAATATGCTGAATGGTTCTCTGCCTGATCTTAGTGGAATGAATCTTCTAACCTATGTGGATCTGAGCAACAATACTTTCAACTCTACTGATATTCCTTCATGGGCTTCAAGTTTGCCGTCTTTAACAACATTGAAGTTGACAAACACCGGACTTCAAGGGCAGATACCTGTGTCCTTATTTAAGCAGTCCAATTTAGAGTCTGTAGAATTGAGGGACAACAAACTCAGTGGCGCCTTAGATATTGGTGATGCCTACAGCAACCGTCTGCAACTTATTGATTTGGAGAATAATGATATCACTGACTTCAACCAGAAAAACATAAACTCTAATGTTACAGTAGTACTAGTTCGCAATCTGATTTGTTTAGAAACAGGAGCTGCTTCACAAAGTTACTGCCAAGAACCGAAACCCAAATCCCTATATTCAACACCACCATATAATTGTGCACCTCTTCTTTGCAGTTCTGACCAGATTTCCAGTCCCAACTGTAAATGTGCACGTCCTTACGCTGGAAGTCTATATTCCAGAGCTCTTGGTTTCTCAAACCTTGACAACTCAAGTTACTATGAGGATCTTGAACAATCTTTGATGACTGCTTTTCGATCACAAAATCTTCCAGTCGATTCTGTTTCTCTGAGTAATCCTTTCAGAAATTCATCCACTGATTATTTTGAACTGACCCTGAAAATATTCCCATCTCAAAATGATCGTTTCAATAGAACTGGAATTTCAAATATTGCTTTTGTGCTTACCAACCAGATTTTTAAGCCCCCAGAATCTTTCCTTCCTTACTTCTTCATTGGTGATGACTATGGATCCTACGAAGAAAAATCAAAGAAGTCGACACATACAGGGGTTATAGTTGGTGCAGTGGTTGCTGTTGTGGTCTTTCTGGTACTATCACTCCTTGCAGGGATATATGCCATCCGCCAAAAGAAAAGAGCGAAAAGAGCCACTGACCTGAACCCTTTTGTAAATTGGGAACTGAACAAGAATAGTGGCAAAGCTCCTCAGTTAAAAGGAGCTCGATGGTTTTCTTTAGAAGAGCTAAAGAAATACAGCAGCAACTTCTCAGAAGTCAACACTGTTGGATCTGGGGGCTACGGAAAGGTCTACCACGCTATTATGCCCAGTGGGGAATCAGTTGCCATCAAACGGGCTGCAAAAGAATCTATGCAGGGTGCTGCTGAGTTTAAAACTGAGATTGAACTCCTATCAAGGGTCCATCATAAGAATCTTGTTGGTCTTGTGGGTTTCTGTTTCGATAAAGGTGAACAAATGCTGGTGTATGAATATATTCCAAATGGCACTTTAATGGATAGTCTTTCAGGAAAGTCTGGCATCAGAATGGACTGGATGAGGAGGCTAAAAGTAGCCCTGGGTGCGGCCAGGGGTCTGACCTATCTTCATGAACTTGCCAGCCCACCAATTATACACAGGGACATAAAATCAAGCAATATCCTACTTGATGAACACCTGAACGCAAAAGTTGCAGATTTTGGTCTCTCCAAACTTCTTGTTGACAGTGAAAGGGGTCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAGTATTATATGACCCAGCAGTTGACTGAAAAGAGCGATGTATATAGCTTTGGGGTGTTAATGCTGGAACTGGTAACAGCAAGAAGGCCAATAGAGCAAGGAAAATATATTGTAAGAGAGGTGCAAAGCGTAATGGATACATCAAAAGATCTATACAACCTTCATTCCATTCTAGACCCAACCATAAACAAAGTAACAACTCCAAAAGGTTTGGAGAAGTTCGTGGACCTGGCAATGAGATGTGTCAAAGAATATGCAGCTGAGAGGCCAACGATGGCCGAGGTGGTGAAAGAGATTGAGAATATAATGGAGCTTGCTGGATTGAACCCCACTGCTGAATCAGATACAACAACAGAAAGTCAAGTGGAAGCAAGTGTGGGGAATGGTAGCCATCGTTATAGTGAAGATTTTAGCTATAGTGGAATTTTTCCTTCAGTAAGGGTAGAACCTCAGTGA 2862 0.4182 MDQKIKVVLLLLLFQALLVAAQISYQDFIALQGLTESWENIPPSWVGLDPCGSSWEGIHCTNSRVTSIKLGGMNLVGKLSSEIQSMSELETLDLSFNKGLAGTIPEEIGNLRKLKILILVGCNLFGPIPESIGSLQQLTFLALNSNRFSGNIPRTIGNLSNINWLDLADNQLEGPIPVSDDGDDEGPGLDKLLKAKHFHIGNNRLSGGIPAKLFSPTMSLVHVLFDSNQLSGSIPSTLGSVNSLEVVRFDRNQLSGQVPSNLSNLRNLSELYLSNNMLNGSLPDLSGMNLLTYVDLSNNTFNSTDIPSWASSLPSLTTLKLTNTGLQGQIPVSLFKQSNLESVELRDNKLSGALDIGDAYSNRLQLIDLENNDITDFNQKNINSNVTVVLVRNLICLETGAASQSYCQEPKPKSLYSTPPYNCAPLLCSSDQISSPNCKCARPYAGSLYSRALGFSNLDNSSYYEDLEQSLMTAFRSQNLPVDSVSLSNPFRNSSTDYFELTLKIFPSQNDRFNRTGISNIAFVLTNQIFKPPESFLPYFFIGDDYGSYEEKSKKSTHTGVIVGAVVAVVVFLVLSLLAGIYAIRQKKRAKRATDLNPFVNWELNKNSGKAPQLKGARWFSLEELKKYSSNFSEVNTVGSGGYGKVYHAIMPSGESVAIKRAAKESMQGAAEFKTEIELLSRVHHKNLVGLVGFCFDKGEQMLVYEYIPNGTLMDSLSGKSGIRMDWMRRLKVALGAARGLTYLHELASPPIIHRDIKSSNILLDEHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEQGKYIVREVQSVMDTSKDLYNLHSILDPTINKVTTPKGLEKFVDLAMRCVKEYAAERPTMAEVVKEIENIMELAGLNPTAESDTTTESQVEASVGNGSHRYSEDFSYSGIFPSVRVEPQ 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2297 953 ProSiteProfiles Protein kinase domain profile. 632 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2297 953 Gene3D Ribonuclease Inhibitor 185 399 IPR032675 -
Glsi11g2297 953 SMART serkin_6 632 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2297 953 SUPERFAMILY L domain-like 37 398 - -
Glsi11g2297 953 FunFam Leucine-rich repeat protein kinase family protein 185 284 - -
Glsi11g2297 953 Gene3D Transferase(Phosphotransferase) domain 1 708 926 - -
Glsi11g2297 953 CDD STKc_IRAK 638 904 - -
Glsi11g2297 953 ProSitePatterns Protein kinases ATP-binding region signature. 638 664 IPR017441 GO:0005524
Glsi11g2297 953 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 708 918 - -
Glsi11g2297 953 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Glsi11g2297 953 FunFam Leucine-rich repeat family protein 26 181 - -
Glsi11g2297 953 ProSiteProfiles Leucine-rich repeat profile. 267 289 IPR001611 GO:0005515
Glsi11g2297 953 FunFam receptor-like protein kinase FERONIA 600 707 - -
Glsi11g2297 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Glsi11g2297 953 PANTHER RECEPTOR-LIKE PROTEIN 55 41 904 - -
Glsi11g2297 953 SUPERFAMILY Protein kinase-like (PK-like) 612 901 IPR011009 -
Glsi11g2297 953 Pfam Protein kinase domain 633 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2297 953 Gene3D Phosphorylase Kinase; domain 1 602 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2297 Glsi-ChrGlsi11 16087766 16094760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2297 7 953 Receptor kinase-like Gene Family AT5G49760 54.469 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Glsi11g2297 Pkinase 2.1e-49 CL0016