Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2295 ATGGCTTCCTCTAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTTGCAACTCCCACTCCCATCACCACCATCCCCACCAATGGCAGCATGACATTAATCCCCCTCTCATGTCACCTGCAAGCTGCCACAGAAGCCCTTACACTTCAGGAAGTGAGGAGAGAAGTCCAGAGCCAAAGCCGAGATGGAACCCAAAACCAGAGCAAATTCGCATACTGGAAGCCATATTCAACTCTGGGATGGTGAACCCTCCCAGAGACGAGATAAGGAAGATCAGAGCACAATTGCAAGAGTATGGTCAAGTGGGCGATGCCAACGTTTTCTACTGGTTCCAGAACCGTAAATCCAGAAGCAAGCACAAGCTTCGCCTCCTCCAGAACTCTAAGAACCAAACCCCTTCATCTCAAACCACAGCCCCATCTTCCTCCTCCTCCTCATCATCTGAGAAATCCTCTCCGAAAGACTTAACACCCTCTAAAGGGTTTTCTATTGGCTTCTCTAACGTCACTGATGTAATTCCCAACTCTCCCACTGCCTCTGTTAACCAGACCTATTTTCAGACCCACAACGATACCACTCTGGCCCCTTCAGCCGAGCATTTCTTCTTTCCACTGCATCACCACAATGGAGGATCAGGAGGAGTGGCTAATGCTATTACACAAGGCTTTCCCTTCTCCGAACTATCAAATGTGGTTCAATCTCAAGCTCAAGCTCCTGATCATCAACAAAATGTTGGGTCTTACAATAGTCTCTTGCTCAGTGAGATCATGAACCATGAAGCCTCAAAGAAAGACCAAGAAAAGGCCATGAAAATGCAACAACTCCCACACCTCAGCTTCTGTGTCTCTTCTACTCCAATCACTGATGACTCTACTGTCCCTCCCATTAGTACCACCACTGTTACTGTTCCATCCCCCCTCACTCAAAATCAAGGTGTCGTTGAGGCAGGAGCTTGTGGTGGTACGGCGAAATCTACGGTGTTCATTAACGACGTCGCATTTGAGGTGGGTGTGGGTCCGTTCGACGTGCGGGCGGCCTTTGGTGATGACGTGGTGCTCGTCCACGCGTCTGGTCAGCCAGTGCTCACCAACGAGTGGGGCGTCACCCTGCAGTCACTCCAGCACGGCGCTTTTTATTATCTGGTGCGCACGTTAACACCCTGA 1164 0.5009 MASSNRHWPSMFKSKPCNSHSHHHHPHQWQHDINPPLMSPASCHRSPYTSGSEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRLLQNSKNQTPSSQTTAPSSSSSSSSEKSSPKDLTPSKGFSIGFSNVTDVIPNSPTASVNQTYFQTHNDTTLAPSAEHFFFPLHHHNGGSGGVANAITQGFPFSELSNVVQSQAQAPDHQQNVGSYNSLLLSEIMNHEASKKDQEKAMKMQQLPHLSFCVSSTPITDDSTVPPISTTTVTVPSPLTQNQGVVEAGACGGTAKSTVFINDVAFEVGVGPFDVRAAFGDDVVLVHASGQPVLTNEWGVTLQSLQHGAFYYLVRTLTP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2295 387 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 383 IPR044557 GO:0003700|GO:0050793
Glsi11g2295 387 Gene3D - 60 124 - -
Glsi11g2295 387 Pfam Homeodomain 60 120 IPR001356 GO:0003677
Glsi11g2295 387 MobiDBLite consensus disorder prediction 1 16 - -
Glsi11g2295 387 SUPERFAMILY Homeodomain-like 53 124 IPR009057 -
Glsi11g2295 387 CDD homeodomain 59 121 IPR001356 GO:0003677
Glsi11g2295 387 MobiDBLite consensus disorder prediction 1 66 - -
Glsi11g2295 387 ProSiteProfiles 'Homeobox' domain profile. 56 121 IPR001356 GO:0003677
Glsi11g2295 387 FunFam WUSCHEL-related homeobox 11 60 127 - -
Glsi11g2295 387 MobiDBLite consensus disorder prediction 126 160 - -
Glsi11g2295 387 SMART HOX_1 58 125 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2295 Glsi-ChrGlsi11 16080231 16081953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2295 1 382 Wox Gene Family AT2G33880 44.965 2.03e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi11g2295 Homeodomain 1.2e-14 CL0123