Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2290 ATGGCAGTGGCATTATTGTTTACGAAGGCAATTCTGGCACTGGCTATGATGCCATGGCTTTCACTTGCTATGGACATTCACCACCTAAGGCAAGTGGTGGCTCAGTTTAATGCGAGTTGCCTTTTGGTTTTTGGAGATTCAAGTGTTGATCCTGGCAACAACAATGTTCTTCCCACCACCATGAAAAGCAACTTCCCTCCTTATGGGAAGGACTTCTTTAATGGCCTCCCAACAGGAAGGTTTAGCAATGGGCGACTTGCCTCAGATCTCATTGCCGAGGAACTAGGGTTCAGAAAAATAGTGCCAGCATTTCTAGACCCAAATCTGAAACCAGCAGATCTGCCACATGGAGTTAGTTTTGCATCAGCAGCTACGGGCTATGATGATTTGACTGCCAATATTTCGAACGTTCTGCCTGTTTCCAAACAGATAGAGTATTTTGAGCATTATAAGATCCACATGAGAAAATTGTTGGGTGAAGAAAGGGCAGATTACATCATAAGAAATGCCTTTTATATTATTAGTATGGGTACCAATGACTTCCTGCAAAACTACTACTTGGATCCTACTCGCCCTAAGCAGTTCAGCGTGTTACAGTTCCAGAATTTCCTGCTCTCTCGCATGGCTCGTGACATTGAGGTGATGCATAGGCTCGGAGCGAGTAGAATAATAGTTGTAGGGGTGCCACCACTGGGGTGCATCCCACTTATGAAGACGTTGAGGAACCAGAGAAATTGTGTGGCGAGCTTGAACAGAGTAGCCTACTCATTCAATGCAAAAGTATTGCAGCAACTGGCCACCATGAAGGCAAAGTTGGGTTTGAAGACTGCGTACGTTGACGCTTTTGGCACTATCCTAAGTGCTGTGTTGGACCCCAAGAAACACGGTTTTGTGGAAGGTTCAAAGGGATGTTGCGGGACGGGAACAGTAGAATACGGGGATTCATGCAGAGGGATGGATACTTGTTCAGATCCATCCAAATACGTATTCTGGGACGCTGTTCATCCCACAGAGAAGATGTACAAGATGATAGCTGATAATGCCATAGAATCTGTGGCAAGAGAGTTATCTGCTTAA 1077 0.4522 MAVALLFTKAILALAMMPWLSLAMDIHHLRQVVAQFNASCLLVFGDSSVDPGNNNVLPTTMKSNFPPYGKDFFNGLPTGRFSNGRLASDLIAEELGFRKIVPAFLDPNLKPADLPHGVSFASAATGYDDLTANISNVLPVSKQIEYFEHYKIHMRKLLGEERADYIIRNAFYIISMGTNDFLQNYYLDPTRPKQFSVLQFQNFLLSRMARDIEVMHRLGASRIIVVGVPPLGCIPLMKTLRNQRNCVASLNRVAYSFNAKVLQQLATMKAKLGLKTAYVDAFGTILSAVLDPKKHGFVEGSKGCCGTGTVEYGDSCRGMDTCSDPSKYVFWDAVHPTEKMYKMIADNAIESVARELSA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2290 358 PANTHER GDSL ESTERASE/LIPASE EXL3 32 347 - -
Glsi11g2290 358 SUPERFAMILY SGNH hydrolase 171 351 - -
Glsi11g2290 358 Gene3D SGNH hydrolase 25 356 IPR036514 -
Glsi11g2290 358 CDD SGNH_plant_lipase_like 40 349 IPR035669 -
Glsi11g2290 358 Pfam GDSL-like Lipase/Acylhydrolase 41 346 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2290 Glsi-ChrGlsi11 16042771 16045817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2290 41 357 Pollen Coat Proteome AT1G75910 35.077 8.84e-59 192