Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2283 ATGGGAAACCCGGATATGTCCAGAATATCTCTGCCGATAGCTCTAGCCTGTCTACTGCGCCATGGTCTTTATCAAGATCCTCCACGTCAGCTAATCTCAATCAATAGCAGTAGGTTACGTTGTACCAGAACAGTTGCCAATCCCACCAAACAATCACAGACATCGAAGTCAACAGGAAGAAATGAGTTGGTTGTTGCTATTAGCTCTGACAGCTTAGCACAGGAACTTCAACATCGTAATTGGTTTAAGACAATATGTAGGTTAAGAAAATCAAAAGAAGGCAGTTCAAAGAAAGCAAAGGGATCTCCAGCTTCAGAGAAACAAAGCGCATTGAAGTTGAACAGTTGTACGGGAAAAGATTCGAGTATAGCAAATGATTTTATGAGTGAAAATCTTGCATCACCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAAGATCCAAACAGCATTCCGGGCTTATATGGCTAGAAAATCTCTACGGCGCTTGAAAGGGTCTGCAAAACTTAAGATTCTGACGCAAGGTTATACTGTTAAAAAGCAAGCCGGTACAACCTTAACTTACCTTCATTCATGGTGCAAGATTCAGGCTGAGATTAGAGCTCGCCGACTCTGTATGGTCACAGAAGACAGGATCAGGCGGAAGAAACTGGAGTCTCAACTAAAACTTGAGGCAAAGCTCCATTATCTAGAGGTGGAATGGAGTGGTGGTTCTGAAACCATGGAGGAAATCCTTACAAGGATACATCAGAGAGAAGAAGCAGCAGTTAAGCGGGAAAGAGCCATGGCATATGCCTTTTCTCATCAGTGGAGGGCTAACTCTAATCAGAGCCAAGGGCTTGGTAATTATGAACTTAGCAAAGCTAATTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGTCCATGGGAAAGTCGTCTTCCCAATAAAACTAATAGCCCCAAAAAAACTCAAAATAAGCAGTCAAACAAGGTTCATAAGGATAAGAGCCCAGCAACACCAAAAACCTCAGTTTCAGTTAAACCTCCTTTGGCCAATGCAAAAGGGACTACAAAAGCTAGGAGATTGTCTTATCCTTCCACAGAAAAAAATGTGGTGCATGAAGAAAAGCTATAA 1119 0.4281 MGNPDMSRISLPIALACLLRHGLYQDPPRQLISINSSRLRCTRTVANPTKQSQTSKSTGRNELVVAISSDSLAQELQHRNWFKTICRLRKSKEGSSKKAKGSPASEKQSALKLNSCTGKDSSIANDFMSENLASPGVSVETIAATKIQTAFRAYMARKSLRRLKGSAKLKILTQGYTVKKQAGTTLTYLHSWCKIQAEIRARRLCMVTEDRIRRKKLESQLKLEAKLHYLEVEWSGGSETMEEILTRIHQREEAAVKRERAMAYAFSHQWRANSNQSQGLGNYELSKANWGWSWKERWIAARPWESRLPNKTNSPKKTQNKQSNKVHKDKSPATPKTSVSVKPPLANAKGTTKARRLSYPSTEKNVVHEEKL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2283 372 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Glsi11g2283 372 MobiDBLite consensus disorder prediction 305 372 - -
Glsi11g2283 372 Pfam IQ calmodulin-binding motif 143 161 IPR000048 GO:0005515
Glsi11g2283 372 PANTHER IQ-DOMAIN 5-RELATED 81 336 - -
Glsi11g2283 372 MobiDBLite consensus disorder prediction 93 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2283 Glsi-ChrGlsi11 15984814 15990489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2283 80 360 IQD Protein Family AT2G33990 52.465 1.89e-86 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2283 11 15984814 15990489 Glsi11g2283 11 15984814 15990489 ECH