Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2279 ATGAATGTGAAAACTGGAAACTCTGGGCGGAGACGATGGAATGGAGTGGTGGTCATAAATACTGCGACGCACGGCACAACTAGAACGCCATTAGAGCCATATAGACCCAACCAAACCCCCATTTCAACATTCAACATCATGCAAGTTCGCAAAGACTCAAAAACCACTCTCATCCTCCCTTCTCGCCTTCCCTTCCTCCACGACCATGCCCTCTCTCTTTCTCACCTGGACACTGATTGCAACCTCCACCTCACCTTCCGTTACCTTCGTGCTTACGTAAACAACAACCACACCTCCGGCGACCCGTTCTTCGTTATCTCTTCCGCTCTCTCCGAAGCTCTGGTTCACTATTACCCAATTACCGGCACACTCCGTCGCCGCCAAGACGAAGACCAACGGCTGGAGGTTTGGTGCTCCGCCGGTCAAGGCGTCCCACTGATTCGGGCTAATGTGGATTTTTCGCTTGACTCAGTTAATTATCTCGACGACCCAGAGTCTCCTTTCCTCGAACAGTTGGTGCCCGACCCAGACATTGATGAGGCCATGAGCCACCCATGTGTCCTACAAATCACGGAATTCAAGTGCGGTGGATTCACTCTTGGGGCAGCGATACACCACTCATTGTGCGATGGGCTCGGCGCGACTCAGTTTTTCAGTGCGGTGGCTGAGTTGGCTCGCGGAGCATCCCGCGTAACGGTGGAGCCAATTTGGAACCGCGAGAAGTTATTAGGTCCCAGAGAGCCGATCCGAATTGATTCGCCGGTGATCCGGGAGTTTCTGCATTTGGACAAGGGCTTCTTGCCGTACAAACAGGACATTGGTCCGGTTGTGAGGGCCTGCTTTCATGTAAGAGACGAGTGCTTAGACAGGTTCAAGAGCTCGCTGTTTGAGCAATCTGGGTTGAACTTCACTGTCTTTGAGGCTTTGGGTGCATACATTTGGAGGTCCAAGGTTAAGGCCTCATGGATTCAGGCTGATGAGAAGATAAAGTTTGCATACTCGATTAATATACGCAAACTAGTGAAGCCTTCGCTTCCACTTGGCTATTGGGGTAATGGTTGTGTTCCAATGTATGTACAGCTGAGGGCCAAAGATCTGATAGAGAAACCCATATGGGAAACAGCAGAACAAATCAAGAAGAGCAAAAGTAATGTCAGTGATGAGTATGTTCGCTCCTTCATTGATTTTCAAGAGATGCATTATGCTAATGGGATCACAGCAGGAAAAGGGGTGAGTGGGTTCACAGATTGGAGGCACTTGGGCCATTCAGCGGTGGATTTTGGGTGGGGAGGTCCAGTCACTGTTTTGCCACTCGCGAGGAACCTCCTTGGCAGTGTTGAGCCTTGCTTCTTCTTGCCTTATTCAACAGCTAGCGCAGGAAAGAAGGATGGGTTCAAGGTTTTGGTGACGTTGGCAGAGGCTGCCTTGCCTGCTTTCAGAGAGGACATGCAAGTGTTTTCCCAGTAG 1467 0.5051 MNVKTGNSGRRRWNGVVVINTATHGTTRTPLEPYRPNQTPISTFNIMQVRKDSKTTLILPSRLPFLHDHALSLSHLDTDCNLHLTFRYLRAYVNNNHTSGDPFFVISSALSEALVHYYPITGTLRRRQDEDQRLEVWCSAGQGVPLIRANVDFSLDSVNYLDDPESPFLEQLVPDPDIDEAMSHPCVLQITEFKCGGFTLGAAIHHSLCDGLGATQFFSAVAELARGASRVTVEPIWNREKLLGPREPIRIDSPVIREFLHLDKGFLPYKQDIGPVVRACFHVRDECLDRFKSSLFEQSGLNFTVFEALGAYIWRSKVKASWIQADEKIKFAYSINIRKLVKPSLPLGYWGNGCVPMYVQLRAKDLIEKPIWETAEQIKKSKSNVSDEYVRSFIDFQEMHYANGITAGKGVSGFTDWRHLGHSAVDFGWGGPVTVLPLARNLLGSVEPCFFLPYSTASAGKKDGFKVLVTLAEAALPAFREDMQVFSQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2279 488 Gene3D - 44 258 IPR023213 -
Glsi11g2279 488 PANTHER ACYL TRANSFERASE 4 53 486 - -
Glsi11g2279 488 Pfam Transferase family 54 484 - -
Glsi11g2279 488 Gene3D - 269 482 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2279 Glsi-ChrGlsi11 15970103 15972504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2279 105 437 Monolignol Biosynthesis Gene Families AT5G48930 31.609 2.43e-38 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2279 11 15970103 15972504 Glsi11g2279 11 15970103 15972504 ECH