Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2259 ATGGCGTCCACCAAAGAACGTGAAAACTTCGTCTACATCGCCAAGCTTGCTGAGCAAGCCGAGCGTTACGAAGAAATGGTGGATGCGATGAAGAAGGTTGCGAAGCTCAATGTTGAATTGACAATTGAAGAGCGAAACCTTCTCTCAGTTGGGTACAAAAATGTAGTGGGTGCAAGGAGAGCTTCGTGGAGGATTCTGTCCTCGATTGAACAGAAGGAGGAAGCAAAAGGGAACGATCTGAGTGTGAAGCGTATAAAGGAGTATAGGCAGAAGGTGGAATCGGAGCTTTCGGATATCTGTAGCGATATTATGAGTGTTATGGATGAGCATCTTATTCCCTCATGCTCGGGTGGTGAATCCAGTGTGTTTTTCTACAAAATGAAAGGCGACTATTATCGGTATCTGGCAGAATTTAAGACTGGCGATGAGAGAAAAGAGGCTGCTGATCAGTCGATGAAAGCATATCAGGCAGCTTCCACTACAGCCGAGGCTGAGTTACCTCCCACACATCCCATCAGATTGGGTTTGGCTTTGAATTTCTCTGTCTTTTATTATGAAATTCTGAACTCTCCTGAAAGAGCCTGTCACCTTGCCAAGCAAGCCTTTGATGAAGCAATCTCAGAGTTGGATACTCTGAGTGAGGAGTCTTACAAAGACAGCACACTGATTATGCAGCTTCTGAGAGATAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGCTGAGGAACAAAAGGTAGAGTCTGCCCGAGCTGCTGGAGGTGAAGATAAAGAGTAA 783 0.4572 MASTKERENFVYIAKLAEQAERYEEMVDAMKKVAKLNVELTIEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDLSVKRIKEYRQKVESELSDICSDIMSVMDEHLIPSCSGGESSVFFYKMKGDYYRYLAEFKTGDERKEAADQSMKAYQAASTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKVESARAAGGEDKE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2259 260 MobiDBLite consensus disorder prediction 237 260 - -
Glsi11g2259 260 SMART 1433_4 7 248 IPR023410 -
Glsi11g2259 260 Pfam 14-3-3 protein 14 235 IPR023410 -
Glsi11g2259 260 Coils Coil 13 33 - -
Glsi11g2259 260 MobiDBLite consensus disorder prediction 240 260 - -
Glsi11g2259 260 Gene3D - 1 250 IPR036815 -
Glsi11g2259 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Glsi11g2259 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Glsi11g2259 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Glsi11g2259 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Glsi11g2259 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Glsi11g2259 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Glsi11g2259 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Glsi11g2259 260 FunFam 14-3-3 protein epsilon 2 248 - -
Glsi11g2259 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Glsi11g2259 260 PIRSF 14-3-3 1 248 IPR000308 -
Glsi11g2259 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Glsi11g2259 260 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2259 Glsi-ChrGlsi11 15838566 15842017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2259 1 260 14-3-3 family AT2G42590 78.707 5.90e-156 433
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2259 11 15838566 15842017 Glsi11g2259 11 15838566 15842017 ECH