Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2254 ATGGGGGATTTCCGGGATTCTCTCACGCCGCCGCCCAACCATGCCCGTCCGATGCCCGTCCGCGAAGATTGCTGGAGCGAGGAAGCTACCTCCACCCTCGTCGACGCTTGGGGCCGTCGTTTCCTCGAGCTAAACCGTGGGAACCTCCGTCAGAAGGACTGGCAGGACGTTGCCGATGCTGTCAACGCCCTCCATGGTCATACCAAGAAGACGCACCGTACAGATGTTCAGTGTAAGAACCGCATCGATACTATTAAGAAGAAGTATAAGCACGAGAAGAATAAAGTTTCATCCCCAAATGGCGCTGTTCCTTCCTCTTGGCCGTTCTTCGATCGCTTGGATGCTTTGATTGGGCCCAATTCGAATGCGAAGAAGTCGGTTCGGTCGCCTCCGGTGGCACTTCCTTTGCCGTATCGCAAAAACCCGTCCCCGGTATCTGCGGTGCCGGCGATGGCCTTGGTGGCGCTGCCCCAGAAGCGTTCAGCGGCATCTGTATTAGAGGATGGATACTTTAGGAGGAATTATTCAGCGGTGGCAGCTGCGGCAGCTGCAGCGGAGGCTGACGAGGATGAGGACGAGGAGGCGGAGGACGAGGAGGAAGAAGATGAAGAGAGGGGAAGCGAGGTTGAGGAAGGGGAGAGGGAGAGAGAAGGCATGAGGAGGTTGGCAAAGGCAATTGAGAGGTTTGGGGAAGTATATGAAAGAATGGAGAGAGAAAAAATGAGACAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTACTAAAGATCTGGAAGTACAAAGGATGCAGATGTTTATGGACACGCAGGTTCAGCTGGAGAGGATCAAGCGTGGGAAGCGATCTGGGTCTAATGATATGTATAGCTAG 870 0.5379 MGDFRDSLTPPPNHARPMPVREDCWSEEATSTLVDAWGRRFLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKHEKNKVSSPNGAVPSSWPFFDRLDALIGPNSNAKKSVRSPPVALPLPYRKNPSPVSAVPAMALVALPQKRSAASVLEDGYFRRNYSAVAAAAAAAEADEDEDEEAEDEEEEDEERGSEVEEGEREREGMRRLAKAIERFGEVYERMEREKMRQMVDLEKQRMQFTKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMYS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2254 289 MobiDBLite consensus disorder prediction 1 21 - -
Glsi11g2254 289 Coils Coil 219 253 - -
Glsi11g2254 289 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
Glsi11g2254 289 MobiDBLite consensus disorder prediction 185 208 - -
Glsi11g2254 289 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 280 IPR044823 -
Glsi11g2254 289 Coils Coil 178 205 - -
Glsi11g2254 289 FunFam trihelix transcription factor ASIL2 25 91 - -
Glsi11g2254 289 MobiDBLite consensus disorder prediction 182 220 - -
Glsi11g2254 289 Gene3D - 25 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2254 Glsi-ChrGlsi11 15799115 15803290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2254 21 288 Trihelix Transcription Factor Family AT3G14180 33.333 5.23e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi11g2254 Myb_DNA-bind_4 1.4e-25 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2254 11 15799115 15803290 Glsi11g2254 11 15799115 15803290 ECH