Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2243 ATGTCAGAAGGATACGAAAACGAAAGGTGTAATGAGGAGGACAATTCATTGGGATCTTCACAGAAATATTGCTCATCCTTTGACTTGAATGCGGAAGCTAGTACTGACGAAAACAATGATACAGACGATGAGGCGTGTGAAGTCATAGCTGAGGAGAATGAACAAGCAAAGGATGAGGGCACGTCGGCTAATAAAAGCACATCACGTGAAGGAAATGAACGAAGAGGAACGGTGAGACAATATGTTAGATCAAAGATGCCTCGGCTTCGATGGACTCCTGACCTACATCTCTCCTTTGTGCACGCTGTTGAAAGGCTTGGTGGTCAAGAGAAAGCTACACCCAAATTGGTGCTTCAGCTAATGAATGTGAGAGGACTTAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAGCTAGACGAGGCTGGGCAAGGAACTATCTCAGGCAAGAGGAAAAGTAATATTGAACCTGAAGACAGTAATAGATATCACCATTCCAACAATGGGATAGGTTTAATCATCTGCATAACTGCATTTGGTTCCCTAGGTCAACTGAAGAAAATACTTGGTCAGACACACAGATCGACCCAAAAAGAAGATTGTTTAATTTCTCAGTCTCTGAACCCTCATCAGTATTTTAAGATGGGAAATGGGGGAATCATTCTAGCAGCTAATTGCAACGAGAATAGTCTTGTTCAAGGTCGCTTTCAGCCCTCCTTCTCCCTATCACGCTCGCATACAAGGCCTACTGATTCAAGGCACCAGCAATGGTACTTCAATCATCAACCTTTTAAAAGGCCAAGTTCCGAAGTGATCTCCTCCACAACCTTACAAACTCAATTAAATTCAGCAGCTTCAAACCGAATTCAAGTAATGGATACAACCAGCAAAGTTACACCCATGAGGTCTAGCCAATTTCTGGAAGAAAAAAGGTGGCCTCCATTAGAACTAATTAACACTCATCAATGGAAGTTCAAAAGGTTTCCTACCCATACTGCTTGGACTAATGCTGGCACGCCAACTGAGCTACATCAATTTGCCACCAAGCCTTCATCTGCTTGGCCAGCTGAATGGAGCCTTGCGAGCAACCATTCCAATAGTCTAAAGCTAGAATTTGAGCCTCCATTTCGGATTAAGTTGAATCAAGAGATATTACGGGAAGAGAAGCAATGGTTGCCTGATTTGAGACTGGGGTTGAGTCAGGGAGATGGCAAAGACGACGGGAAGAGTCATTATTGCAAAGAAACGCAAGAAATTAGCACTAAGCTTTCACTTTCTTAG 1293 0.4316 MSEGYENERCNEEDNSLGSSQKYCSSFDLNAEASTDENNDTDDEACEVIAEENEQAKDEGTSANKSTSREGNERRGTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQEKATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQGTISGKRKSNIEPEDSNRYHHSNNGIGLIICITAFGSLGQLKKILGQTHRSTQKEDCLISQSLNPHQYFKMGNGGIILAANCNENSLVQGRFQPSFSLSRSHTRPTDSRHQQWYFNHQPFKRPSSEVISSTTLQTQLNSAASNRIQVMDTTSKVTPMRSSQFLEEKRWPPLELINTHQWKFKRFPTHTAWTNAGTPTELHQFATKPSSAWPAEWSLASNHSNSLKLEFEPPFRIKLNQEILREEKQWLPDLRLGLSQGDGKDDGKSHYCKETQEISTKLSLS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2243 430 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 66 205 IPR046955 GO:0003700
Glsi11g2243 430 MobiDBLite consensus disorder prediction 146 166 - -
Glsi11g2243 430 MobiDBLite consensus disorder prediction 1 15 - -
Glsi11g2243 430 FunFam Myb family transcription factor 85 143 - -
Glsi11g2243 430 MobiDBLite consensus disorder prediction 1 81 - -
Glsi11g2243 430 Pfam Myb-like DNA-binding domain 89 139 IPR001005 -
Glsi11g2243 430 MobiDBLite consensus disorder prediction 35 49 - -
Glsi11g2243 430 MobiDBLite consensus disorder prediction 16 34 - -
Glsi11g2243 430 Gene3D - 86 143 - -
Glsi11g2243 430 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 142 IPR006447 GO:0003677
Glsi11g2243 430 SUPERFAMILY Homeodomain-like 85 141 IPR009057 -
Glsi11g2243 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 143 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2243 Glsi-ChrGlsi11 15742758 15746932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2243 78 171 G2-like Transcription Factor Family AT2G42660 63.265 1.05e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi11g2243 Myb_DNA-binding 1.2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2243 11 15742758 15746932 Glsi11g2243 11 15742758 15746932 ECH