Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2241 ATGGGGGTTACATGTAACCCATATGGATTTTGGTTCAGATTTTATGTTGTTTTGATTTGTATGAGGGCCATTCGTGCGTGTTGGTCGCATAATGATGAAGTATCAGCTTTGTTGGAATTCAGGGCCAGAATAACATCTGATCCTTATGGTGCTTTGGCTAATTGGATTCCAAATGTTTGTAATCATAATCATTGTGAGTGGTTTGGTATTCGTTGTGTCGACAGCAAAGTGCAAACGTTGAACCTAAGCGGACTATCTTTGGAAGGGACACTGGCTCCTGAGCTTGGAAAACTAGCTCACTTAAAATCTCTTGTATTAGACAAGAATAATTTTTCCGGTACCATTCCAAAAGAACTTGGAGACCTCACCAAGCTGGAGTTGTTGGATTTGAGAGACAATAACTTGACTGGAAATGTTCCAGCAGAATTGGGGAGAATGTTGTTCCTAAAACACTTGCTTCTTTGCGGCAATAACATTGAAGCCAGTTTTCCTCAAGAACTTGGGAAGCTCAATTTGCTCTCTGAACCACTACTTGTTGATAATCATACGTCTCAAATGACAGCTGAAATTGGCTGCATGAATAGAAAGTTTGGACACTGGATCAAGCTAGGGAAGGCCTATGGCTATGAAGAGAATTGCCGTGACAGTCTGCATAGTTCAGATGAGTCGGTGATTGCCCAGAATGTAGTAGTCAATTTTGAACGTCGTAAATTACTTGATCAGTTCAGTAACCTCCCGGCTGCACCTATCAGCGGTGGGCCTGCCAAACAGATCATTTCTCTTCCAACCACCCTGAGTAGTGGAGCTTTCCCAGCTGTGCCAGTTGCCAAGAAGAATCAAAGTCCATCTCCTGCACCACAGCCTCAACTGGAAGCTGCTAGAAATGAAACAAATCAACAACCTTCAGCTAATGATGCTTCGGGAAATTTTTGGAAGTACATAATTATTATTTTAGGTGTGGCTCTGCTGGTCATTGTTACAATTGTCCTGTTTTGCTTGTGGAATAAACAAGCAGCAAAAGCAATTAGCCCTTGGAAGACAGGATTAAGTGGACAGTTACAGAAAGCATTTATTACAGGGGTCCCTAAGTTGAATAGAACAGAACTGGAGACAGCCTGTGAGGATTTCAGCAATATCGTTGATTGCATTGATCATTGCACCCAATACAAGGGAACCCTGTCCAGTGGAGTTGAGATTTCTGTTATGTCAACTGTTTTCACTTCTTCCAAAGACTGGTCGAAGAACATGGAGAAGGCCTATCGGAAAAAGATTGATACTTTATCTCGTGTAAACCATAAGAACTTTATCAATCTTATTGGCTACTGTGAGGAAGAAGAACCATTCACTAGGATGATGGTGTTTGAGTATGCACCGAACGGAACCCTATCTGAGCATTTGCATGTTAAGGAAGTTGAACATCTTGATTGGAATGCAAGAGTGAGGGTTGTTATGGGCATAGCTTATTGTCTTCAGTACATGCACCATGAACTGAATCCACCAGTAGCTCATTCCAACCTTACTTCAACGTCAATCTTGTTGACAGATGATTTTGCTGCTAAGATTGCAGAGACCAGTTTTAGCACGTCAAGTGAAGATGAGTCAAAGGCAAAGAATTCTGAATTGCCACCCCATGCTGATTCTGAAACAAATGTCTATTATTTTGGAAAATTGTTACATGAAATCATTTCTGGGAAGGTACCTGACTCTGAAGACCTAGGCCAAATTGAGAACTGGGCTGCTGATCCCACCCTGCGGTCCTTCAAAAAAAATGAATTTGATGTCATCTGTGAGGTTATCCAAGAATGCATCCAACCTAATCCAAGGTTAAGACCAACAATGAAGGACATAACTGCCAAATTGAAGGAAGTCATTAATATATCACCTGACCAAGCAGTACCAAGACTTTCTCCACTCTGGTGGGCTGAACTGGAGATCTTGTCAGGGGAGGCGACTTAA 1956 0.4187 MGVTCNPYGFWFRFYVVLICMRAIRACWSHNDEVSALLEFRARITSDPYGALANWIPNVCNHNHCEWFGIRCVDSKVQTLNLSGLSLEGTLAPELGKLAHLKSLVLDKNNFSGTIPKELGDLTKLELLDLRDNNLTGNVPAELGRMLFLKHLLLCGNNIEASFPQELGKLNLLSEPLLVDNHTSQMTAEIGCMNRKFGHWIKLGKAYGYEENCRDSLHSSDESVIAQNVVVNFERRKLLDQFSNLPAAPISGGPAKQIISLPTTLSSGAFPAVPVAKKNQSPSPAPQPQLEAARNETNQQPSANDASGNFWKYIIIILGVALLVIVTIVLFCLWNKQAAKAISPWKTGLSGQLQKAFITGVPKLNRTELETACEDFSNIVDCIDHCTQYKGTLSSGVEISVMSTVFTSSKDWSKNMEKAYRKKIDTLSRVNHKNFINLIGYCEEEEPFTRMMVFEYAPNGTLSEHLHVKEVEHLDWNARVRVVMGIAYCLQYMHHELNPPVAHSNLTSTSILLTDDFAAKIAETSFSTSSEDESKAKNSELPPHADSETNVYYFGKLLHEIISGKVPDSEDLGQIENWAADPTLRSFKKNEFDVICEVIQECIQPNPRLRPTMKDITAKLKEVINISPDQAVPRLSPLWWAELEILSGEAT 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2241 651 ProSiteProfiles Protein kinase domain profile. 259 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2241 651 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Glsi11g2241 651 SUPERFAMILY L domain-like 27 186 - -
Glsi11g2241 651 Gene3D Ribonuclease Inhibitor 29 224 IPR032675 -
Glsi11g2241 651 MobiDBLite consensus disorder prediction 280 303 - -
Glsi11g2241 651 Pfam Protein tyrosine and serine/threonine kinase 407 620 IPR001245 GO:0004672|GO:0006468
Glsi11g2241 651 Gene3D Transferase(Phosphotransferase) domain 1 458 629 - -
Glsi11g2241 651 FunFam Nuclear pore complex protein NUP107 30 191 - -
Glsi11g2241 651 SUPERFAMILY Protein kinase-like (PK-like) 410 640 IPR011009 -
Glsi11g2241 651 FunFam Inactive receptor-like serine/threonine-protein kinase 348 456 - -
Glsi11g2241 651 MobiDBLite consensus disorder prediction 275 303 - -
Glsi11g2241 651 PANTHER PROTEIN MALE DISCOVERER 2 14 648 - -
Glsi11g2241 651 Gene3D Phosphorylase Kinase; domain 1 346 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2241 Glsi-ChrGlsi11 15730227 15735718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2241 80 631 Receptor kinase-like Gene Family AT5G56040 26.494 1.32e-40 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Glsi11g2241 PK_Tyr_Ser-Thr 6.7e-21 CL0016