Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2239 ATGAACAAGGGAGGAATGGAGAACAAAGGAAAGATTTTGATGCAGAAGTATGAGCTTGGCCGTATGCTTGGCCAAGGCACATTCGCTAAGGTTTACCATGCGAGAAACTTGAGCACTGGGCAGCACGCTGCTATCAAAATCATTGACAAAGAGAAGGTTCTGCGGGTTGGTTTGATCGACCAAATCAAGCGAGAAATCTCTGTGATGAGCCTCGTGAGGCACCCCAACATTGTGCAGCTTTACGAAGTCATGGCAAGCAAAACTAAGATCTATTTTGCAATGGAGTACGTGAGAGGTGGAGAGCTTTTTAATAAAGTTTCCAGAGGGAAGCTTAAGGAAGATTTGGCCAGAAAATATTTCCAGCAGCTAATTGGGGCTGTTGAGTTCTGCCATAGCAGAGGGGTCTACCACCGTGATCTGAAACCAGAGAATCTTCTTCTGGATGAAAATGGGGACCTCAAAGTTTCGGACTTTGGGTTAAGTGCATTGTGGGAATCCAGGAAGAACGATGGCCTTCTTCACACTATGTGTGGGACTCCAGCTTATGTAGCCCCTGAAGTGATCAACAAGAAGGGCTATGATGGAGCCAAGGCAGATATTTGGTCTTGTGGGGTGATTCTGTTTGTTCTTTTGGCAGGTTATCTTCCTTTCGATGACAAAAATCTGATCGAAATGTACAGGAAGATTAGCAAAGCACAATTCAAGTGCCCACAGTGGTTCCCACCTGAGGCAAGAAAGCTAGTCGCAAGAATCCTCGATCCCAATCCAAGGACAAGAATAAACATGGCCAAGATAATGGATACAACTTGGTTTAGAAAGGGGTATAAGCAGATTGAAGCACCCCCCTTGCCACCTTCCCCTGCAAACGGTGAAGATATCTCAGTTAGCGAAGTTGAGGCTGCGTTTGCTTCATCAAATCCAGATGATAATAATAGCTCAGTACCAGACAATGCAGAAAGCTCCATGAAACTATCTTGTTTCAATGCATTTGATATCATATCTCTTTCTTCAGGATTCGACCTTTCTGCTTTGTTCGAGAAAGATAGGAGTCCAAGACAGCACGCTAGATTCAGTACCACAAAAGAAGCCTCAATGATTGTGTCAAAACTGGAAGAGATAGCTCAGGTAGACAGCAGATTCAAGGTTCTGAAGAAAAATGGGACTGTCACATTGCAAGGAAGCAAGTTAGGGCGAAAGGGCCAACTTGGGATAGATGCAGAAATTTTTGAAGTAACATCTACGTTTCATATTGTGGAGGTGAAGAAAACATCGGGGGACACGTTGGAATATATGGAATTTAGGGACCAAGACTTGAAGCCTTCTCTGAAGGATATAGTGTGGGAATGGCAAGGAAGTGAGCAGCAGCAGCAACAATAG 1377 0.443 MNKGGMENKGKILMQKYELGRMLGQGTFAKVYHARNLSTGQHAAIKIIDKEKVLRVGLIDQIKREISVMSLVRHPNIVQLYEVMASKTKIYFAMEYVRGGELFNKVSRGKLKEDLARKYFQQLIGAVEFCHSRGVYHRDLKPENLLLDENGDLKVSDFGLSALWESRKNDGLLHTMCGTPAYVAPEVINKKGYDGAKADIWSCGVILFVLLAGYLPFDDKNLIEMYRKISKAQFKCPQWFPPEARKLVARILDPNPRTRINMAKIMDTTWFRKGYKQIEAPPLPPSPANGEDISVSEVEAAFASSNPDDNNSSVPDNAESSMKLSCFNAFDIISLSSGFDLSALFEKDRSPRQHARFSTTKEASMIVSKLEEIAQVDSRFKVLKKNGTVTLQGSKLGRKGQLGIDAEIFEVTSTFHIVEVKKTSGDTLEYMEFRDQDLKPSLKDIVWEWQGSEQQQQQ 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2239 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Glsi11g2239 458 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Glsi11g2239 458 Pfam NAF domain 326 382 IPR004041 GO:0007165
Glsi11g2239 458 Gene3D Kinase associated domain 1, KA1 326 448 - -
Glsi11g2239 458 CDD STKc_SnRK3 16 270 - -
Glsi11g2239 458 SUPERFAMILY Protein kinase-like (PK-like) 13 308 IPR011009 -
Glsi11g2239 458 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2239 458 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 442 - -
Glsi11g2239 458 FunFam Non-specific serine/threonine protein kinase 7 314 - -
Glsi11g2239 458 FunFam Non-specific serine/threonine protein kinase 322 447 - -
Glsi11g2239 458 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2239 458 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Glsi11g2239 458 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Glsi11g2239 458 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2239 458 Gene3D Transferase(Phosphotransferase) domain 1 7 325 - -
Glsi11g2239 458 CDD CIPK_C 328 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2239 Glsi-ChrGlsi11 15721515 15722891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2239 6 451 CBL-interacting serine-threonine protein kinases AT5G45820 65.772 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi11g2239 Pkinase 1.7e-74 CL0016