Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2231 ATGTTCCTTGTGAAATGTAATGTTATGTTTCTCTTCAATGCTGCATCTCTATATTCTGATCTTTCATTAATTTCATGGAATTTTAAAGCACGAGAATTTTCCACGTTGCCTGTGTTTGGAGTGAAGCAAAGCAAAGTGACTAGCAACTCAGAAGTGAAGATCCCACTAAAAAGTTTCAGACTCTTTGGTCCTCTACTTGATATGATTTCTTGTTTCATGGAAGATGTGAAACGGGTGGTTTGGCTCATCTTCTTTCTATGGAATTGGTTGCCAATGACTGGAGGGACAAATAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTGGCTGCTTTGATGTCGATGAAGAGTAAAATGAAGGACAAATTGCTTGTTATGGATGCTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAGCATGGTCGTTTGCTCTTCTGAGGGTTATGTGATTTCCCTGGACATGGCCAGTATGGGTTTATCTGGAACGGTTTCCCCAGGAATTGGGAATTTGAGCCACCTTCGAACATTGTTATTGCAGAACAATCAGTTATCTGGTCCCATCCCAACTGAGATAGGAAAGCTTTCGGAGCTTCAGACTCTTGACCTTTCTGGTAACCAGTTTGTTGGTGAAATTCCTGGTTCTTTGGGCTTTTTGACTCGTCTAAGTTACTTGCGGCTCAGTAGAAATAAACTGCATGGACAGATTCCTCAAATCATTGCAAATCTCACAGGCCTTTCAGTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCTACTCCAAAAGTTTTGGCAAAAGGTTACAGTATTTCAGGAAACAACTACCTCTGCACATCTTCATCAGCACAAATGTGTATGGGTGTTTCAAGACCATTAAACGAAACTGGTTCATCTCTGAAAGTCAGTAGTCATCGCCAATGGGCGCTATCTGTTGCTATTGGCATTAGCTGCACATTTGTAATTTCAGTGATGCTGCTTATCTATTGGGTGCATTGGTATAGATCACGCATCTTCTATACATCTTATGTAGAGCATGATTATGAATTTGGCATTGGTCATTTGAAGAGGTTTTCCTTCCGTGAATTGCAAATTGCTACTAGCAATTTCAGTCCCAAAAACATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGATTGCTTCCAAATAAAATGTTGGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTGCAGTTTCAAACTGAAGTAGAGATGATAGGCTTGGCAGTTCATCGGAATCTCTTACGACTCTATGGCTTTTGTATGACATCTGATGAAAGGTTACTTGTTTACCCTTACATGCCTAATGGCAGCGTTGCTGATCGCTTGAGAGACACTTTCCGCGAAAAGCCATCATTGGACTGGAACAGGCGAATGCGTGTAGCTCTTGGGGCTGCTCGTGGGCTTGTATATTTACATGAGCAGTGCAACCCAAAAATTATCCACAGGGATGTTAAGGCTGCAAATATTTTGCTAGATGAAAGTTTTGAAGTTGTGGTGGGGGATTTCGGTCTTGCTAAGCTCTTGGATCAAAGAGATTCACATGTCACTACTGCAGTGCGAGGAACTGTAGGGCACATTGCCCCAGAGTATCTCTCCACTGGACAGTCATCTGAAAAAACTGATGTTTTTGGATTTGGCATATTGCTTTTGGAGCTCATTACAGGGCAGAAGGCGTTGGATGCTGGAAATGGTCAGGTCCAGAAGGGAATGATTCTTGATTGGGTTAGAACCTTATCTGAGGAGAAGCGGCTGGAAGTGCTCGTTGATAGGGATTTGAAGGGATGTTTTGATCCAGTGGAGTTAGAAAAAGCTGTGGAGTTGTCTCTACGGTGTACTCAATCGCATCCCAGCCTCCGGCCAAAGATGTCGGAAGTTATGAAGATCCTAGAAGGGCTTGTTGGGCTGGGGCAGCCTGAGGAGTCACGAAGTGGAGATAACCTATGTGATGAAAGGACTTGCAGTTTCTCCAGAAATTATAGTGATGACCGTGAAGAACCTTCTTTTATTATTGAAGCCATTGAGCTTTCTGGACCTCGATGA 2076 0.4273 MFLVKCNVMFLFNAASLYSDLSLISWNFKAREFSTLPVFGVKQSKVTSNSEVKIPLKSFRLFGPLLDMISCFMEDVKRVVWLIFFLWNWLPMTGGTNSLLSPKGVNYEVAALMSMKSKMKDKLLVMDAWDINSVDPCTWSMVVCSSEGYVISLDMASMGLSGTVSPGIGNLSHLRTLLLQNNQLSGPIPTEIGKLSELQTLDLSGNQFVGEIPGSLGFLTRLSYLRLSRNKLHGQIPQIIANLTGLSVLDLSFNNLSGPTPKVLAKGYSISGNNYLCTSSSAQMCMGVSRPLNETGSSLKVSSHRQWALSVAIGISCTFVISVMLLIYWVHWYRSRIFYTSYVEHDYEFGIGHLKRFSFRELQIATSNFSPKNILGQGGFGVVYKGLLPNKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTFREKPSLDWNRRMRVALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEVVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQVQKGMILDWVRTLSEEKRLEVLVDRDLKGCFDPVELEKAVELSLRCTQSHPSLRPKMSEVMKILEGLVGLGQPEESRSGDNLCDERTCSFSRNYSDDREEPSFIIEAIELSGPR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2231 691 SUPERFAMILY L domain-like 107 273 - -
Glsi11g2231 691 Pfam Protein kinase domain 372 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2231 691 FunFam Somatic embryogenesis receptor kinase 1 338 444 - -
Glsi11g2231 691 FunFam Putative LRR receptor-like serine/threonine-protein kinase 105 287 - -
Glsi11g2231 691 Gene3D Phosphorylase Kinase; domain 1 338 444 - -
Glsi11g2231 691 ProSiteProfiles Protein kinase domain profile. 369 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2231 691 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 99 640 - -
Glsi11g2231 691 SUPERFAMILY Protein kinase-like (PK-like) 351 642 IPR011009 -
Glsi11g2231 691 SMART serkin_6 369 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2231 691 Pfam Leucine rich repeat N-terminal domain 106 145 IPR013210 -
Glsi11g2231 691 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Glsi11g2231 691 Pfam Leucine Rich Repeat 198 219 IPR001611 GO:0005515
Glsi11g2231 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Glsi11g2231 691 Gene3D Ribonuclease Inhibitor 105 287 IPR032675 -
Glsi11g2231 691 Gene3D Transferase(Phosphotransferase) domain 1 445 646 - -
Glsi11g2231 691 FunFam Somatic embryogenesis receptor-like kinase 1 445 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2231 Glsi-ChrGlsi11 15664454 15669825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2231 113 691 Receptor kinase-like Gene Family AT5G45780 72.069 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi11g2231 Pkinase 1.6e-44 CL0016