Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2222 ATGGTTGATGGATGCATGTCTGAAATCCTTTCTGATGTATTCTCTGTGATGAGAATCCAAGTTGCTTACTGTCTGTTGCCATTAAAGGAAAAAAAAAGATCTCTGCCCTTGAAGAGTGCACAAACTGAAATGAAGACTTGTGATGAATGGAAACCTTTTCTAGCAATGATAGCTATTAATTTTGCTTTCGCTGTAGTGAATACTCTTCTCAAGAAAGTCCTAGAAGAGGGTATGAACCATTTGGTTTTCATCACATACCGGTTGTCAATTTCTTGCGTTTTCTTAGCACCAATCGGCTACTTTTGGGAAAGAAATGGGAGGCCAAGGCTCACATTTCGCATTCTATGTAACCTCTTCTTCAGTGCCATAGTTGGGACATCAGTCACACAATACTTCTTCCTTTTGGGAATCCAATACACCTCTGCTACTTTTAGTTGTGCCTTTCTTAACATGGTGCCTGCGATCACGCTCATAATGGCATTACCATTTAGGTTAGAGAGTGTGAACATAAAAAGCAACAGTGGGAAAGCGAAGATACTTGGTACGGTGGTGTGCATTGGCGGCGCATTGTTATTGACACTGTACAAAGGAAAGCCGTTGTTCAGTTATTCTCATTATCAGGCTGCAACTCCAAAATCCATGAGTTCTGAAGTGAAGCTAGCTTACTCTCCGAGAAACACAGAGAGATGGACCATTGGGGTGATAGCTCTGATAGTGGGAACCCTCTCCTGGTCTTCTTGGTTTCTTTTGCAATCAAGCTTAGGCAAGAGATACCCTTGCCAGTATTCTAGTACAGCCATCATGACCTTCTTTGGAGCCATTCAATCAGCTATTCTGAGCTTGTCCACAGGCCGGAACTTGTCCATATGGGTTCTCAAGGGAAAGATACAAATACTCACTGCTCTGTATTCTGGGATGGTTGGATCTGGGTTGTGCTTTGTGGGGCTTTCATGGTGTGTGAAGAAAAAGGGTCCCGTGTTCACTGCAGCATTCAGCCCTCTTGTTCAAGTCATGGCAGGCATGATTAATATCCCTGTCTTGCATGAGCAGCTCCATCTTGGAAGTGTGATGGGATCCATCTTGGTGATGATGGGATTGTACATACTGCTATGGGGTAAGAAAAAGGAGATGCAGAATGGTTTGAGTAAGCTAGGCCAACCAGATGAAGAAATCAAGGAGCAAGAGCCGCAAGTATAA 1197 0.4344 MVDGCMSEILSDVFSVMRIQVAYCLLPLKEKKRSLPLKSAQTEMKTCDEWKPFLAMIAINFAFAVVNTLLKKVLEEGMNHLVFITYRLSISCVFLAPIGYFWERNGRPRLTFRILCNLFFSAIVGTSVTQYFFLLGIQYTSATFSCAFLNMVPAITLIMALPFRLESVNIKSNSGKAKILGTVVCIGGALLLTLYKGKPLFSYSHYQAATPKSMSSEVKLAYSPRNTERWTIGVIALIVGTLSWSSWFLLQSSLGKRYPCQYSSTAIMTFFGAIQSAILSLSTGRNLSIWVLKGKIQILTALYSGMVGSGLCFVGLSWCVKKKGPVFTAAFSPLVQVMAGMINIPVLHEQLHLGSVMGSILVMMGLYILLWGKKKEMQNGLSKLGQPDEEIKEQEPQV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2222 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 375 - -
Glsi11g2222 398 Pfam EamA-like transporter family 54 193 IPR000620 GO:0016020
Glsi11g2222 398 Pfam EamA-like transporter family 232 370 IPR000620 GO:0016020
Glsi11g2222 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 86 196 - -
Glsi11g2222 398 PANTHER WAT1-RELATED PROTEIN 51 382 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2222 Glsi-ChrGlsi11 15622195 15625900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2222 50 304 Nodulin-like Gene Family AT3G30340 51.373 3.72e-91 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2222 11 15622195 15625900 Glsi11g2222 11 15622195 15625900 CCT