Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2217 ATGGACAGTAGGTTCAACAACAGCAACCAAAATATCAATGAACAAGAAGACGCTGATATAGCTCAAGAAAACATTGCGGAGTCCCCTCCTTCCGCCGCCTTTAGTATCGATAGCTTGATCACTTCCACTTCTTCCCCTAAAAGAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATTCCAATTAAGGATGTAGAAGGATCTCGGCTTAGAGGAGAGAGCAATTCTCCACCATCTGATTCATGGGCTTGGAGAAAGTACGGCCAGAAACCCATCAAAGGCTCTCCTTATCCCAGAGGATACTACAGGTGCAGCAGTTCCAAGGGTTGCCCCGCAAGAAAACAAGTGGAAAGGAGCCGGGTGGACCCCACCATGATCGTCGTAACTTACTCTTGCGAGCACAATCACCCTTGGCCGGCTTCTAGAAACCACCACCACAAAGCCGCCGCCAATAAGGCCATCACGGTACCCGAACCCGAAGTCGTCGCGAGCCAGGTCAAGCCGGAACCGGAGCCAGAGTCTGAGGAGAAGTTTGCGGACCTCGGGGACGAGTCGTTGATCACCACAGTGGATGAGTTGGGCTGGTTCGGTGAAATGGAGGCGACAGCAACGACTTCATCGGCTGTTCTGGAGAGTCCGATGCTGGCCAGGGACGATGCGGACGTGGCGTCGATGTTCTTGCCGATGAGGGAGGAGGACGAATCGCTGTTCGCCGACTTGGGGGAGCTGCCGGAGTGCTCGGTGGTATTCCGGCGAGGGGCGATGGAGAGGGAGGTGGAGCGGCGGCGGCGGTGTGCGGCGCCGTGGTGTGGGACCACGAGTTGA 825 0.5588 MDSRFNNSNQNINEQEDADIAQENIAESPPSAAFSIDSLITSTSSPKRSRRAIQKRVVQIPIKDVEGSRLRGESNSPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMIVVTYSCEHNHPWPASRNHHHKAAANKAITVPEPEVVASQVKPEPEPESEEKFADLGDESLITTVDELGWFGEMEATATTSSAVLESPMLARDDADVASMFLPMREEDESLFADLGELPECSVVFRRGAMEREVERRRRCAAPWCGTTS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2217 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 248 IPR044810 GO:0003700
Glsi11g2217 274 SUPERFAMILY WRKY DNA-binding domain 76 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g2217 274 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2217 274 MobiDBLite consensus disorder prediction 1 33 - -
Glsi11g2217 274 Gene3D WRKY domain 68 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g2217 274 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2217 274 MobiDBLite consensus disorder prediction 1 18 - -
Glsi11g2217 274 SMART WRKY_cls 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2217 274 FunFam WRKY transcription factor 65 62 139 - -
Glsi11g2217 274 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2217 Glsi-ChrGlsi11 15587876 15589235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2217 17 251 WRKY Transcription Factor Family AT1G29280 56.379 1.03e-84 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g2217 WRKY 2.8e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2217 11 15587876 15589235 Glsi11g2217 11 15587876 15589235 ECH