Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi11g2206 | ATGGCTTCAGGGGCTATCTGTTCGTCCCAGCGGCGGAGGAGGTCGCCGTCTTTGGAAGCATTTCTTGCTCCGGTTGACCTGACAGATATTGCCCTCGTTCAAACTCTCGTGTCTGTTGCTAGCGAGCTTGTCTCAAGCTTCTCTGACCGTTCGTCCTTCTTTCAGCGCAGGAATTCGCGGTCGCTTATCCGAAAAGTCGAGGTTTTTCAGTTGCTTTTGGAGTATCTGCGGGATGCCCGCACGAATATTCCAACGACAGCGGTGGTTTGTTTAAAGGAGCTTTATTATCTACTGTATCGGTCGAAGATTCTTCTTGATTATTGCTTGCAATCGAGTAAGTTATGGCTTTTGCTTCAGAACCATTCAATTTCTGGTCATTTCCATGATTTGAACCAAGAAATATCGGCTCTTTTGGATGTATTCCCGATTAAGAACATTGAATTGAGCGACGATGTTAGGGAACAGATTGAGCTATTGCAGAAACAATCACGGAGGGCTAAGCTGTTTATTGACAAAAAAGATGATGCGCTCAGGATTAAATTCTTGTCATTTCTTGATGAGTTTGAGAATGGGCGAATTCCTGATTCGGCAGGGATACGATCCTTCTTTGTAGAGAAATTGCAGATTCTGGATGCCAGGAGTTGTAGAACAGAAATTGAGTCGTTGGAAGAGCAGATTGTTAATCACGAGGGAGATGTTGAGCCAACAATTTCTGTGCTTAATGGGTTGGTTGCATTGACACGCTACTGCAGATTTTTTCTTTTTGGATTTGAGGAAGATGAACTAGAATTGAGAAATAGGAATCAGAAAAAACTTAAAAAGAGGTTGATTATTCAAGAAATTGCTGAAACATTTGTAACTATTCCAAAGGACTTTCACTGCCCAATATCGTTGGAGTTGATGCTAGACCCAGTGATAATCTCCACAGGACAAACATATGAACGGAGTTTCATATCCCGGTGGATGGAAGAAGGGCATTGTACTTGTCCAAAAACCGGGCTAATGCTTACCCACACCCAGATTGTTTCTAATGGAGCTCTAAAGAATTTGATCATGCAGTGGTGCACTGCACATGGAATCCCTTATGAGCCACTGGAGAGGATAAATGCATTGCCGGGAAGTTTTGCATCAGCTTCTCCTACCAAAGCTGCCCTTGAAGCCAATAAAGCAACAGCATTGCTTCTCATTCAACAGCTGGCAAATGGATCAGGAGCTGCAAAGACTGTAGCTGCTCGGGAGATACGATTGCTAGCAAAAACAGGTAAAGAAAATCGTGCCTTCATTGCAGAAGCCGGAGCAATTCCCTATCTGCAGAAACTACTTTCATCTCCTAACGCTGTTGCTCAGGAGAATTCAGTGACTGCATTGCTCAACCTATCTATATACGAGCAAAACAAAAGCCGGATAATGGAGGAGGAAGGTTGTCTGGGATCAATAGTTGATGTGTTGAAATTTGGTCACACAACTGAAGCAAGGGAAAATGCTGCTGCAACATTGTTCAGCCTCTCTGCCGTCCATGACTATAAGAAGAGAATTGCAGATAAGGGGGGAGCAGTTGAAGCCCTGGCAGGGCTGCTGCAAGAGGGTGCCCTAAGAGGAAAGAAGGATGCAGTAACAGCTTTATTCAATCTTTCCACCCACAGTGAAAATTGTGTTAGACTGATAGAGGCAGGGGCTGTAACAGCTCTAATTGGGGCTTTGTGGAATGAAGGAGTTGCTGAGGAAGCAGCTGGTGCCCTCGCTTTGATTGTTCGGCAGCCTATTGGAGCCAAAGTAGTGATGGGGGAGGAAGTGGCACTAACTGGATTGATAGGAATGATGCGATGTGGGACACCGAGGGGTAAAGAGAATGCTGTTGTGGCCTTGCTGGAATTGTGCCGCAGTGGAGGTACAGCTGCAGCTGAGAGAGTGGTTAGGGCACCAGCTTTGGCTAGTTTGCTTCAAACCCTGCTTTTTACAGGGACAAAACGAGCAAGAAGGAAAGCGGCTTCACTTGCTAGAGTGTTTCAGAGATGTCAAAATGCATCTCTGCATTATGGTGGGTTAGGTGTAGGGTATGCATTTGCTAGCAATTCATCTGCAAATAGGGATACAAGCTTTGCTGGCGATGTATCAGTATCAATGTCCATTTCTATACCTGTTTTGTAG | 2148 | 0.4493 | MASGAICSSQRRRRSPSLEAFLAPVDLTDIALVQTLVSVASELVSSFSDRSSFFQRRNSRSLIRKVEVFQLLLEYLRDARTNIPTTAVVCLKELYYLLYRSKILLDYCLQSSKLWLLLQNHSISGHFHDLNQEISALLDVFPIKNIELSDDVREQIELLQKQSRRAKLFIDKKDDALRIKFLSFLDEFENGRIPDSAGIRSFFVEKLQILDARSCRTEIESLEEQIVNHEGDVEPTISVLNGLVALTRYCRFFLFGFEEDELELRNRNQKKLKKRLIIQEIAETFVTIPKDFHCPISLELMLDPVIISTGQTYERSFISRWMEEGHCTCPKTGLMLTHTQIVSNGALKNLIMQWCTAHGIPYEPLERINALPGSFASASPTKAALEANKATALLLIQQLANGSGAAKTVAAREIRLLAKTGKENRAFIAEAGAIPYLQKLLSSPNAVAQENSVTALLNLSIYEQNKSRIMEEEGCLGSIVDVLKFGHTTEARENAAATLFSLSAVHDYKKRIADKGGAVEALAGLLQEGALRGKKDAVTALFNLSTHSENCVRLIEAGAVTALIGALWNEGVAEEAAGALALIVRQPIGAKVVMGEEVALTGLIGMMRCGTPRGKENAVVALLELCRSGGTAAAERVVRAPALASLLQTLLFTGTKRARRKAASLARVFQRCQNASLHYGGLGVGYAFASNSSANRDTSFAGDVSVSMSISIPVL | 715 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi11g2206 | 715 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 432 | 474 | IPR000225 | GO:0005515 | |
| Glsi11g2206 | 715 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 287 | 362 | IPR013083 | - | |
| Glsi11g2206 | 715 | Gene3D | - | 558 | 663 | IPR011989 | - | |
| Glsi11g2206 | 715 | SUPERFAMILY | RING/U-box | 277 | 362 | - | - | |
| Glsi11g2206 | 715 | CDD | RING-Ubox_PUB | 289 | 340 | IPR045210 | - | |
| Glsi11g2206 | 715 | FunFam | RING-type E3 ubiquitin transferase | 285 | 361 | - | - | |
| Glsi11g2206 | 715 | ProSiteProfiles | U-box domain profile. | 287 | 361 | IPR003613 | GO:0004842|GO:0016567 | |
| Glsi11g2206 | 715 | PANTHER | U BOX DOMAIN-CONTAINING | 60 | 672 | - | - | |
| Glsi11g2206 | 715 | SMART | Ubox_2 | 291 | 354 | IPR003613 | GO:0004842|GO:0016567 | |
| Glsi11g2206 | 715 | SUPERFAMILY | ARM repeat | 394 | 669 | IPR016024 | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information