Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2183 ATGGAATCGAAAACTCCAGCATGGTTTAAACTGAGGAAGCAGTCATCCCTGGCTCCTGAACGCCGTAGCGATGAATCAGAGCTCCATAAAGAGGATGACGACGTGAAAGATATTGATCCGGGAATGAGGCTGATGTATTTGGCCAATGAAGGCGATCTGGATGGTATTCGTGAGATATTGGACACAGGTGTTAATGTGAATTTCAGGGATACTGATAATCGCACGACTCTTCACGTTGCAGCTTGTCAGGGTTTCACTGATGTGGTTGCGTTGTTGCTCGAGAATGGGGCTGAGGTTGAATCAAAAGATCGCTGGGGAAGCACGCCTCTTGCAGATGCTATATTTTATAAAAACAATGACGTGATCAAATTATTGGAGAAGCATGGGGCAAAGCCTCTGATGGCTCCTATGCATGTTAACCATGCACGTGAAGTCCCAGAATATGAAATCAATCCTAACGAACTTGATTTTACCCATAGTGAGGAGATAACAAAGGGAACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGGTTGCTGTAAAAAAGCTTGGGGATGATGTGATTACTGATGAAGAGAAAGTGAAGGCATTTAGGGATGAGCTTGCTTTGTTTCAGAAGATTCGACACCCTAACGTAGTCCAGTTTCTGGGTGCTGTGACTCAGAGCAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGCATTTTTGAAAAGGAAAGGAGCTTTGAAACCAACCACAGCTGTGAGATTTGCTCTTGATATTGCTAGGGGAATGAGTTATTTGCATGAAAATAAGCCATCTCCAATAATTCACCGTGATCTTGAGCCCTCTAATATATTGCGGGATGATTCGGGCCACCTAAAAGTTGCAGACTTTGGGGTAAGCAAGTTGCTGGCAGTTAAAGAGGACAGGCCTCTAACTTGCCAAGATACTTCTTGCCGCTATGTGGCTCCAGAGGTTTTTAAACAAGAAGAGTATGACACTAAAGTGGATGTTTTCTCATTTGCTTTAATTCTGCAAGAGATGATAGAAGGCTGCCCACCATTTCATACAAAGCAAGAAGACGAGGTTCCGAGGGTATATGCTGCAAAAGAGCGTCCACCTTTCAGAGCTCCAGCCAAGCGTTATGCCCATGGACTGAGAGAATTAATTGAAGAGTGCTGGAATGAGAATCCAGCGAAGAGGCCAACATTTAGGAAAATAATAACAAAGCTTGAATCCATGTACAACACTCTTGCTCATAAAAGACGTTGGAAGACCTCTGAAATGCTTCCAGAATCTGGAAGCCATTTTGAGGAGAGATCACTCAAATCTAAGCAGTCCCGGCAGCCGTTCTTCTCGTTCTACAGCCAGCAATATATGAAGTTGCACGACGTTTTGCAGATTGGAACAAGAATATTGGCTTTCCAATTGGAGCATTCTTTCTGTTGTATGACATGGAATTATTGCCTCCAGCCACCCTCCAGAGTTACTGCTCTGCTACCATGTCCTCTCATTCTTCACCATGTGACCCCCTACCCATCTAACACCCAGGCCACCTATTTTATATCACTTGCTTTTCTTGGTTATTCAGGAGAGGGGGCGGGTGCCACTAATGGTGGGGAAACTGGTAGTAACAGGAACCAATTTCCATCTACTTCATGTTTTCTTGAAGGACGTCATTACCCTGTAGAATGGGAAGGAAAAGAGAGAGGAAGTGAAAAGCTTTGTACCACTTTGGAAACTTCATACTTCACAGGAAAGCATCACAGGCAAATATCTCGTAACAAATACTGGCATATACCAATTACCATTGTGGGTTCTCTTTGGCAAAAGGAAGGGCTGAGACCAAACATCAATGACACTAAAGTAGATTTCCATTATTCTTTAAAGTCAATCTATTTCCCATTTGAGCTAAGCTTTCTTCTAAAGCTGATGGGAGTGAAAGCATACTTGAATTGGTTGAAACCACACAAGAGCTTGACGACAAAGAAGAACGCATTTTCTGTAGCAATTAGATGGGTGAAGCAAGAGGTATGTGGTTCCATAGTTACCCTCAAAAATGGTCCTCCTGGTAGATATGGGCAAGATTTTCTTCTTGTGAAACAGAACGAGTTTGACCCATGA 2121 0.4328 MESKTPAWFKLRKQSSLAPERRSDESELHKEDDDVKDIDPGMRLMYLANEGDLDGIREILDTGVNVNFRDTDNRTTLHVAACQGFTDVVALLLENGAEVESKDRWGSTPLADAIFYKNNDVIKLLEKHGAKPLMAPMHVNHAREVPEYEINPNELDFTHSEEITKGTFCSALWRGTEVAVKKLGDDVITDEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLKRKGALKPTTAVRFALDIARGMSYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFHTKQEDEVPRVYAAKERPPFRAPAKRYAHGLRELIEECWNENPAKRPTFRKIITKLESMYNTLAHKRRWKTSEMLPESGSHFEERSLKSKQSRQPFFSFYSQQYMKLHDVLQIGTRILAFQLEHSFCCMTWNYCLQPPSRVTALLPCPLILHHVTPYPSNTQATYFISLAFLGYSGEGAGATNGGETGSNRNQFPSTSCFLEGRHYPVEWEGKERGSEKLCTTLETSYFTGKHHRQISRNKYWHIPITIVGSLWQKEGLRPNINDTKVDFHYSLKSIYFPFELSFLLKLMGVKAYLNWLKPHKSLTTKKNAFSVAIRWVKQEVCGSIVTLKNGPPGRYGQDFLLVKQNEFDP 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2183 706 SMART ANK_2a 105 134 IPR002110 GO:0005515
Glsi11g2183 706 SMART ANK_2a 72 101 IPR002110 GO:0005515
Glsi11g2183 706 SMART ANK_2a 40 68 IPR002110 GO:0005515
Glsi11g2183 706 Gene3D - 9 148 IPR036770 -
Glsi11g2183 706 Pfam Ankyrin repeats (3 copies) 44 132 IPR002110 GO:0005515
Glsi11g2183 706 Gene3D Transferase(Phosphotransferase) domain 1 233 462 - -
Glsi11g2183 706 FunFam serine/threonine-protein kinase STY46-like 150 233 - -
Glsi11g2183 706 ProSiteProfiles Ankyrin repeat region circular profile. 72 104 - -
Glsi11g2183 706 Pfam Protein tyrosine and serine/threonine kinase 174 410 IPR001245 GO:0004672|GO:0006468
Glsi11g2183 706 SUPERFAMILY Protein kinase-like (PK-like) 144 410 IPR011009 -
Glsi11g2183 706 CDD STKc_MAP3K-like 163 410 - -
Glsi11g2183 706 Gene3D Phosphorylase Kinase; domain 1 149 232 - -
Glsi11g2183 706 SUPERFAMILY Ankyrin repeat 32 134 IPR036770 -
Glsi11g2183 706 ProSiteProfiles Ankyrin repeat profile. 72 104 IPR002110 GO:0005515
Glsi11g2183 706 MobiDBLite consensus disorder prediction 15 35 - -
Glsi11g2183 706 FunFam Integrin-linked protein kinase family 24 148 - -
Glsi11g2183 706 FunFam Os01g0748600 protein 143 429 - -
Glsi11g2183 706 ProSiteProfiles Protein kinase domain profile. 157 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2183 706 MobiDBLite consensus disorder prediction 1 35 - -
Glsi11g2183 706 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 148 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2183 Glsi-ChrGlsi11 15311524 15324312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2183 9 435 MAP Kinase Kinase Kinase AT4G18950 68.065 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Glsi11g2183 PK_Tyr_Ser-Thr 8.2e-55 CL0016