Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2177 ATGACATTAGAAGATGTAAACGGTGATATTGAAATTAAACATGTCAGCTTTAAATATCCAAGGCCCGATGTTCAAATTTTCAAGGATTTGTGTCTTAGTATACCCACTGGAAAGAATGATGTAATTACATTGCTCATTTCTTTCTCTGCGGACTGTTGCTTTGGTTGGAGAAAGTGGCAGGGCAGCGCAGAATCAACATTTATCAGTCTCTTAGAGAGATTCTACGACCCTGATTCTGGACATGTACTACTGGGTGGACACGAAATCAAGGAATTCAGGTTAAGCTGGTTAAGGCAGCAAATGAGTTTGGTTTGTCAAGAGCCCATTCTTTTCAATGAAACCATCGGCGACAGCATAGCTTATGGCAAAGTGGGAGTTTCTACAAAGGAAGAGATAGTTGCAGCAGCCAAATCAGCCAATGCACACAGCTTCATAAGCTCTCTTCCAAACGCTCACCGCCTTGCTGCAATCAAAGGGGCTGACATTATAGCAGGAGTTAAGAATGGGGTGATTGCTGAGCAGGGAAGACATGATTCGTTAATGAAGATTACTGATGGAGTTTATGCTTCACTGGCAGCCCTCCATATGAGGCATCGTAAGAAAAACAAGAAGAGAGCAAAAACCCAAGTTTAA 633 0.4218 MTLEDVNGDIEIKHVSFKYPRPDVQIFKDLCLSIPTGKNDVITLLISFSADCCFGWRKWQGSAESTFISLLERFYDPDSGHVLLGGHEIKEFRLSWLRQQMSLVCQEPILFNETIGDSIAYGKVGVSTKEEIVAAAKSANAHSFISSLPNAHRLAAIKGADIIAGVKNGVIAEQGRHDSLMKITDGVYASLAALHMRHRKKNKKRAKTQV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2177 210 Gene3D - 2 150 IPR027417 -
Glsi11g2177 210 Pfam ABC transporter 61 152 IPR003439 GO:0005524
Glsi11g2177 210 Gene3D - 152 203 IPR027417 -
Glsi11g2177 210 PANTHER ABC TRANSPORTER B FAMILY 151 194 IPR039421 -
Glsi11g2177 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 194 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2177 Glsi-ChrGlsi11 15270226 15271137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2177 6 153 Calmodulin-binding Proteins AT2G36910 40.940 4.40e-31 117