Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2176 ATGGCAGCTTCTTGGAGATACTTGGGTGTTGCAACTGTTCGTATGATTTATATAGTTGACTTTGGAGACCAACATGGAGGTATTCCCCTACATAAAATTGAGGATACCCATCACTCCTATTTGCGTTTAGTGAAGAAAACTGAAGCAGAAGCCCGAAGTTCTCATCTCTATAGTTACAAACACGTTTTCAATGGCTTCGCTGCAGTGCTTACTCCAGATGAAGCTTCCAAGCTTTCAAATATGGAGAAAGTGGTGTCAGTACGTAAGAGTCAGTCAAAAAGGTATTCCTTGCATACCACAAGGTCCTGGGACTTTATGGGCTTACATGAACCTTTAAATCCCTTCACACAATCCAACAAGACAGATGGAGACGTACTATCCAGAGCAAATTATGGGCAAGATGTCATAGTGGGAATAATTGACACTGGTATTTGGCCAGAGTCAAAGAGCTTCAGCGATGAAGGCATGGGGCCTGTTCCCCGAAGATGGAAAGGAATCTGCCAAAATGGAACTGCTTTCAATTCATCAACATGTAATAGAAAGATCATTGGAGCCCGGTACTACCTGCACGGTTATCAATCAGAATATGGGCTTCTAGACCCAAATGAAGATTACGGGTCAGCACGAGACAAAGATGGGCACGGAAGTCACGTAGCGTCCATAGTTGCAGGGCGAACAGTCCCAAACGTGACAACCATTGGAGGGTTCGGAAGTGGGACGGCCTCAGGGGGAGCCCCCTTGGGAAGGCTTGCCATTTACAAAGCATGTTGGCCACACAAGGGCCAATCAAAACACTATGGCATGGAATGCCAAGAGATTGATCTGATGATGGCTATAGACGATGCCATTGGAGATGGAGTTGATGTTCTGAGTTTGTCAGTTGGGTTCGATGATCCACCACCTTTTGCGGAGGATGCGGTTGCAAAGGGAGCATTGAGTGCCATGAAGAACAACATAGTGGTGGTGGCCAGTGCTGGCAACCAAGGCCCTTCTAATCAATCTGTGGCTAACCCAGCTCCTTGGCTTCTCACTGTTGCCGCTAGCACCACCGACCGTTCCTTCCCTGCTCCAATTGTACTAGCCAATGGCTCAAGAGTTCAGGGACAATCGATTACTCCAGAAAAAATGGAAAACAGCTTCCACCCATTGGTGTTTGCCAGAGATGTTGAACATGATTACGTGTTTAGTACAGATTCAGGGTATTGCCTAGACGCTTCCCTTGTTCCAGACAAGGTGAAGGGCAAGATAGTGCTGTGCTTGAGGGGAGTAGGGGATATATTAAATAAAGGATTCGAAGTTCAAAGGGCTGGTGGGGTTGCTTTTATCCTTGCAAACAATATAGATGATGGAAATGACGTACCCTGTGATTCTCATATGATTCCATCCACTAGTGTGGCCACCGAGGATACCCGAAAACTTCTTCAATATATCAGGGATTCCAAGAATCCAGTGGCTCATATTCTTCCAGGGTGGACATCCTTAAATTCCACCCCAGCACCCTCCATGACCTACTTCTCTGGCAGGGGTCCAAATAAACTTGAACCTAATATTATTAAGCCTGATATCACAGCTCCAGGAAGAAACATATTGGGAGCGTGGACTAATGATGATGGCCCTACAAGAATGTCACAGAGAGACCATAGAGTTGCTAACTACAGCATCTTATCTGGAACTTCAATGGCTTGCCCTCATGTCACCGCTGCAGCAGTTCTTCTCAAAGCCATTCACCCCACTTGGAGCAGTGCTGCTATAAAATCTGCCCTCATGACCACAGCTGGGACAACTGACAACACAGGGAAGCCAATAACAGATGAAATAGGGAATCCTGCAACCCCATTCTCAATGGGGTCAGGCCACCTGCGCCCTATAGAAGCGGCGAGTCCTGGACTGGTTTACAATGCCTCTTACACGGACTACGTTCTTTATACCTGTAACCTTACAATAACCCAGGACTTGGGAATTCCATTTAAGTGTCCAGATTCAGCTCCTGAACCAGTCAACCTCAACTATCCATCCATCCAAGTCCACAGACTCAATGGCACCAAGACTATCACGAGGACAGTCACAAATGTTGGTCCCTCCCATTCTACTTACAAGTTCAGCGCTGAGGCACCAAAGGAATACACCATTACGGCCTCTCCTAATGTTCTCGAATTTCATCATAGAGGGCAAGAACTGAGCTTCAACATAACAGTGTCCACCGTTAGCTGGAATGTACCAACCCTGTATGACCCAGATTTCTACTACTTTGGATGGTATGCTTGGACTCATGAACATCACGTCGTCAGAAGCCCAGTAGCCGTGTCTTTCCCATAA 2316 0.4659 MAASWRYLGVATVRMIYIVDFGDQHGGIPLHKIEDTHHSYLRLVKKTEAEARSSHLYSYKHVFNGFAAVLTPDEASKLSNMEKVVSVRKSQSKRYSLHTTRSWDFMGLHEPLNPFTQSNKTDGDVLSRANYGQDVIVGIIDTGIWPESKSFSDEGMGPVPRRWKGICQNGTAFNSSTCNRKIIGARYYLHGYQSEYGLLDPNEDYGSARDKDGHGSHVASIVAGRTVPNVTTIGGFGSGTASGGAPLGRLAIYKACWPHKGQSKHYGMECQEIDLMMAIDDAIGDGVDVLSLSVGFDDPPPFAEDAVAKGALSAMKNNIVVVASAGNQGPSNQSVANPAPWLLTVAASTTDRSFPAPIVLANGSRVQGQSITPEKMENSFHPLVFARDVEHDYVFSTDSGYCLDASLVPDKVKGKIVLCLRGVGDILNKGFEVQRAGGVAFILANNIDDGNDVPCDSHMIPSTSVATEDTRKLLQYIRDSKNPVAHILPGWTSLNSTPAPSMTYFSGRGPNKLEPNIIKPDITAPGRNILGAWTNDDGPTRMSQRDHRVANYSILSGTSMACPHVTAAAVLLKAIHPTWSSAAIKSALMTTAGTTDNTGKPITDEIGNPATPFSMGSGHLRPIEAASPGLVYNASYTDYVLYTCNLTITQDLGIPFKCPDSAPEPVNLNYPSIQVHRLNGTKTITRTVTNVGPSHSTYKFSAEAPKEYTITASPNVLEFHHRGQELSFNITVSTVSWNVPTLYDPDFYYFGWYAWTHEHHVVRSPVAVSFP 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2176 771 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Glsi11g2176 771 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Glsi11g2176 771 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Glsi11g2176 771 Gene3D - 351 494 - -
Glsi11g2176 771 Pfam Subtilase family 132 603 IPR000209 GO:0006508|GO:0008236
Glsi11g2176 771 Gene3D - 641 770 - -
Glsi11g2176 771 CDD PA_subtilisin_like 358 487 - -
Glsi11g2176 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Glsi11g2176 771 FunFam Subtilisin-like protease SBT1.5 134 377 - -
Glsi11g2176 771 SUPERFAMILY PA domain 368 451 IPR046450 -
Glsi11g2176 771 ProSitePatterns Serine proteases, subtilase family, histidine active site. 214 224 IPR022398 -
Glsi11g2176 771 SUPERFAMILY Subtilisin-like 98 630 IPR036852 GO:0004252|GO:0006508
Glsi11g2176 771 ProSiteProfiles Serine proteases, subtilase domain profile. 102 627 - -
Glsi11g2176 771 Pfam PA domain 402 470 IPR003137 -
Glsi11g2176 771 Gene3D Peptidase S8/S53 domain 134 639 IPR036852 GO:0004252|GO:0006508
Glsi11g2176 771 FunFam subtilisin-like protease SBT1.5 351 494 - -
Glsi11g2176 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 10 98 IPR037045 -
Glsi11g2176 771 CDD Peptidases_S8_3 95 592 IPR034197 -
Glsi11g2176 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 50 768 IPR045051 -
Glsi11g2176 771 Pfam Peptidase inhibitor I9 17 92 IPR010259 -
Glsi11g2176 771 Pfam Fibronectin type-III domain 667 768 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2176 Glsi-ChrGlsi11 15265205 15269398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2176 11 770 Subtilisin-like Serine Gene Family AT5G45650 53.040 0.0 798