Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2161 ATGAATCACCAGATAAGCTGGCCATTAGTAGATACACATCTAGCCACTTTCTTACAGGAAAACCTATCACTTAAAAGGTCAAGGGAGGAGATGAATATCTATGGGCAAGAAGATACAGCAGAGGTCCCAAAACCAAAAGTAACGTTTCGAAACTGGCCGAAATGTTTTCGAAGCTTGGTGCGGAAAAAGAACCCTAGGCCATTCCGCCGCTTATATAAACTTGTCCTACACTATCTAACTACGAGGTCGGCAGCAAAGCGAACCCTAATTCGTAGTGAAACCAGGTTAGCAAAAATGGCCGTGCCATTGCTTTCGAAGAAGATCGTGAAGAAGCGGGTCAAGAAGTTCAAGAGGCCGCAGAGCGACCGCAAGATCTCTGTTAAGACAAACTGGCGCAGACCCAAGGGTATAGATTCCCGTGTAAGGAGGAAGTTCAAGGGATGCACTTTGATGCCAAATATTGGTTATGGGTCAGACAAGAAGACTCGACACTATCTCCCAAATGGTTTCAAGAAATTTGTTGTGCACAACGTCTCAGAACTCGAAGTCCTCATGATGCACAACAGGACATACTGTGCTGAGATTGCTCACAATATTTCCACAAGGAAGAGAAAGGAGATAGTTGAGAGAGCTGCTCAGCTTGATGTTGTTGTTACAAACAAAACAGCAAGGCTTCGCAGCCAGGAGGATGAATAA 696 0.4483 MNHQISWPLVDTHLATFLQENLSLKRSREEMNIYGQEDTAEVPKPKVTFRNWPKCFRSLVRKKNPRPFRRLYKLVLHYLTTRSAAKRTLIRSETRLAKMAVPLLSKKIVKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVSELEVLMMHNRTYCAEIAHNISTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2161 231 Pfam Ribosomal protein L32 114 220 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi11g2161 231 CDD Ribosomal_L32_L32e 120 220 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi11g2161 231 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 99 231 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi11g2161 231 SMART Ribosomal_L32e_2 113 220 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi11g2161 231 SUPERFAMILY Ribosomal protein L32e 97 229 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2161 Glsi-ChrGlsi11 15181606 15190078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2161 99 231 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.714 7.69e-84 244