Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2143 ATGGATAACGAGCCTCTTCTTCCATATTTCAGTCCCAGAAAGAAGACTCCTTCGCCCCTCTGCCCACTGCCGGAGCACGACGAGGTCGTTCTCCCTCTTACCCCTTCAGAGCTCAAGGACCGCCTTATCTTTGGCCCTTCTACTTCCCCAACAGGTTCTTCCCCCTTATTTGAGGCCTTAACACTTTCCGTTAATTCCCCTAAACCTTCGTCTTCTTCACAAGACTTTGCAGTAGCCCCTCAGGATACAGAATCCCAACAGTCTTGGCTTATTGACCCCAATTACCCATGCCACAAAACTAATCTCCATCGCTCCAAAACCGCCCCGGCTATAGCGGTAATAAGCGATATTAACCACCAAAGCCCCATGGGTCGACCCCAATTGGGTTCCCAGTCGATTGTTCGCCAAGCGGTTATTCTTCTTATTATTTATTTGTCGTTAGGGGTGATTATTTATTGGTTCAATCGTCATAACTTTTCAGCAACTGAGACTCATCCTGTTGTGGATGCTTTATATTTTTGTATAGTGACAATGTGTACGATTGGCTATGGTGATATTACTCCAAATAGTACAGCAACGAAACTGTTCTCTGTAATGTTTGTATTGGTGGGTTTTGGGTTTATTGACATATTGCTTAGTGGGATGGTCGGTTATGTTCTTGATTTGCAGGAGAATCACTTGCTCCAGACCATGAAGGGTCGAAGTGATGACAAGGATGCGAGATCATATATAATTGACGTGAAGAAAGGGAGAATGAGGATTAGGATGAAGGTGGCCTTGGCATTGGGGGTTGTGGTCCTTTGTATTGGAATTGGTTTTGGTGTCATGCATTTTGTGGAAGGGCTTGGATGGGTGGATTCTTTTTATCTTTCGGTTATGTCAGTAACAACGGTTGGGTATGGTGACCAGGCATTCAAGACGTTGCCTGGTCGCATCTTTGCTGCAATTTGGTTGCTTGTATCGACGCTTGCAGTGGCCCGAGCATTCCTCTATTTGGCTGAAGCAAGAGTGGATAAGCGGAATAGGAGGATGGCAAAATGGATTCTTGGTCAGGATATGACTATTTCTGAGTTTCTTGCTGCAGATATAGACAATAATGGCTTTGTGAGTAAATCAGAATTTGTTATATACAAGCTTAAGGAGATGGGAAAAGTTTCAGAGAAAGACATTATGCAGATTAGTGAGAAGTTTGAGAGGCTAGATGCTGGAAACTGTGGAAAAATAACTCTTGCTGATCTTATGGAGGGTCAACATTGA 1257 0.4399 MDNEPLLPYFSPRKKTPSPLCPLPEHDEVVLPLTPSELKDRLIFGPSTSPTGSSPLFEALTLSVNSPKPSSSSQDFAVAPQDTESQQSWLIDPNYPCHKTNLHRSKTAPAIAVISDINHQSPMGRPQLGSQSIVRQAVILLIIYLSLGVIIYWFNRHNFSATETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSVMFVLVGFGFIDILLSGMVGYVLDLQENHLLQTMKGRSDDKDARSYIIDVKKGRMRIRMKVALALGVVVLCIGIGFGVMHFVEGLGWVDSFYLSVMSVTTVGYGDQAFKTLPGRIFAAIWLLVSTLAVARAFLYLAEARVDKRNRRMAKWILGQDMTISEFLAADIDNNGFVSKSEFVIYKLKEMGKVSEKDIMQISEKFERLDAGNCGKITLADLMEGQH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2143 418 MobiDBLite consensus disorder prediction 1 21 - -
Glsi11g2143 418 PRINTS Two pore domain K+ channel signature 296 305 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi11g2143 418 PRINTS Two pore domain K+ channel signature 176 204 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi11g2143 418 SUPERFAMILY Voltage-gated potassium channels 131 218 - -
Glsi11g2143 418 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 139 392 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi11g2143 418 FunFam Two-pore potassium channel 3 241 355 - -
Glsi11g2143 418 ProSitePatterns EF-hand calcium-binding domain. 362 374 IPR018247 -
Glsi11g2143 418 Gene3D - 131 232 - -
Glsi11g2143 418 Pfam Ion channel 139 216 IPR013099 -
Glsi11g2143 418 Pfam Ion channel 264 333 IPR013099 -
Glsi11g2143 418 Gene3D - 263 326 - -
Glsi11g2143 418 SUPERFAMILY Voltage-gated potassium channels 248 384 - -
Glsi11g2143 418 FunFam Two-pore potassium channel 5 123 232 - -
Glsi11g2143 418 Gene3D - 327 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2143 Glsi-ChrGlsi11 15065207 15069501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2143 3 416 Ion Channels AT4G18160 63.232 0.0 526