Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2142 ATGAGGATTTACAATATCAATGAAACTTATGCTGCAAGACAAGACGACCTGAGACCCATTTCATCTAAAGTTGGTTTATTTCCTTGTCTTCACGCTGTTCTGTGTATTCCTGCAACTCTGCAAGCGGTTTTGTGGCAGACCGATATGGAAAAGGAGCCTCTACTTCCATATGTCAGTCCCAGAAAGAAGACTCCTTCGCTCCTCTGCCCACTGCCGGAGCACGACGAGGTCGTTCTCCCTCTTACCCCTTCAGAGCTCAAAGACCGCCTTATCTTTAGCCCTTCTACTTCCCCAACATGTTCTTCCCCTCTACTTGAGGACTTAGCACTTTCCGTTAATTCCCCTAAACCTTCCTCTTCTTCACAAGACTTTGCAGTAGCCCCTCAAGATACAGAATCCCAACAGTCTTGGCTTATTGACCCCAATTACCCATGCCACAAAACTAATCTCCATCGCTCCAAAACCGCCCCGGCTATAGCGGTAATAAGCGATATTAACCACCAAAGCACCATGGGTAGACCCCAAGTGGGTTCCCAGTCGATTGTTCTCCAAGCGGTTATTCTTCTTATTATTTATTTGTTGTTGGGGGTGATTATTTATTGGTTCAATCGGCATAACTTTGCAGGAACTGAGACTCATCCTGTTGTGGATGCTTTATATTTTTGTATAGTGACGATGTGTACGATAGGGTATGGTGATATTTCTCCCACTAGTACAGCAACGAAACTGTTCTCTGTAATGTTTGTATTGGTGGGTTTTGGGTTTATTGGCATATTGCTCAATGGGATGGTCAGTCATGTTCTTGATTTGCAGGAGAATCACTTGCTCCAGACTATGAAGGGTCGAGGTGATGATGACAAGGATGCGAGATCATATATAATTGACGTGAAGAAAGGGAGAATGAGGATTAGGATGAAGGTGGCCTTGGCATTGGGGGTTGTGGTCCTTTGTATTGGAATTGGTTTTGGTGTCATGCATTTTGTGGAAGGGCTTGGATGGGTGGATTCTTTTTATCTTTCAGTTATGTCAGTAACAACTGTTGGGTATGGTGACCAGGCATTCAAGACGTTGCCTGGTCGCATCTTTGCTGCAATTTGGTTGCTTGTATCGACGCTTGCAGTGGCCCGAGGATTCCTCTATTTGGCTGAAGCAAGAGTGGATAAGCGGAATAGGAGGATGGCAAAATGGATTCTTGGTCAGGATATGACTATTTCTGAGTTTCTTGCTGCAGATATAGACAATAATGGCTTTGTGAGGCAGGTCCCTGAGGCCTCTATACTAGCTGGGATAGTGCATTTAAGAGGTGGGCAAACAAGTTTCGTAGCTAGAAAAGCCTGA 1338 0.4484 MRIYNINETYAARQDDLRPISSKVGLFPCLHAVLCIPATLQAVLWQTDMEKEPLLPYVSPRKKTPSLLCPLPEHDEVVLPLTPSELKDRLIFSPSTSPTCSSPLLEDLALSVNSPKPSSSSQDFAVAPQDTESQQSWLIDPNYPCHKTNLHRSKTAPAIAVISDINHQSTMGRPQVGSQSIVLQAVILLIIYLLLGVIIYWFNRHNFAGTETHPVVDALYFCIVTMCTIGYGDISPTSTATKLFSVMFVLVGFGFIGILLNGMVSHVLDLQENHLLQTMKGRGDDDKDARSYIIDVKKGRMRIRMKVALALGVVVLCIGIGFGVMHFVEGLGWVDSFYLSVMSVTTVGYGDQAFKTLPGRIFAAIWLLVSTLAVARGFLYLAEARVDKRNRRMAKWILGQDMTISEFLAADIDNNGFVRQVPEASILAGIVHLRGGQTSFVARKA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2142 445 Gene3D - 179 280 - -
Glsi11g2142 445 FunFam Two-pore potassium channel 3 290 404 - -
Glsi11g2142 445 PRINTS Two pore domain K+ channel signature 224 252 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi11g2142 445 PRINTS Two pore domain K+ channel signature 345 354 IPR003280 GO:0005267|GO:0016020|GO:0071805
Glsi11g2142 445 SUPERFAMILY Voltage-gated potassium channels 297 401 - -
Glsi11g2142 445 Gene3D - 292 402 - -
Glsi11g2142 445 SUPERFAMILY Voltage-gated potassium channels 181 266 - -
Glsi11g2142 445 Pfam Ion channel 187 265 IPR013099 -
Glsi11g2142 445 Pfam Ion channel 313 375 IPR013099 -
Glsi11g2142 445 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 186 403 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2142 Glsi-ChrGlsi11 15055693 15060993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2142 52 420 Ion Channels AT4G18160 61.399 1.02e-156 449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2142 11 15055693 15060993 Glsi11g2142 11 15055693 15060993 ECH