Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2141 ATGAAAGAACTAAAAAGATGGCCAAATGCAGAGGAGAACAGAATAGAAGTCTCACAATGCAATAATGTCACGGCGAGCTCAATGTCTATGCTGACGTCGGCGCCTCATCAGCACGACAAAGCCGCATACCGTCTCCGCCACGTGCCTGGTCCTGTGTCCGCTACGGTCAAATGCCGGTGCCGGTATAGACAGGGACTTTTCTTAGATCATAATCAGCAGGACACCGGTGGATCTACCATGTACTGTGAAAAAAACATGTTTTCTTCCTTTCCAGGTTCATCAGCTTATGATTCATCACAAACCTTTGATCCCTCTTATATGAGCTTCACGGAATGTCTGCAAGGAACCATGGACTACAATTCACTTGCTGCTTCCTTTGGCTTGTCTCCTTCCTCATCGGAGGTATTTTCATCTGTTGAACTTGAAGGCAATCAAAAGCCGGCAGAAGCTGGAGATTTAGGTGGGGGTGGTGGTGGCAGTTCTGAAACCCTGGCCACCCAGAACTCTTCTATCTCTTCCTCTTCTTCTGAAGCTGGAGGTGAAGAAGATTCAGGGAAGACAAAGAAAGATAGCCAGGTGAAAGGAGAAGAGGGAGGAGAAGGCTCTAAGAAAGGGAGCAAGGGTAGGAAGAAAGGAGAGAAGAAGCAGAAGGAACCAAGGTTCGCCTTCATGACTAAGAGTGAGGTTGATCACCTAGAAGATGGATACAGATGGAGAAAATATGGACAGAAGGCCGTCAAGAATAGCCCTTACCCACGAAGCTACTACAGATGCACTACGCAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAAGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGAAATGCGGCCGGAATGTTCACACCTTCCATGCTAACACAAACAGTAACACCCACTCCACTACTCGCAGGGTCAAACTTCCCGCAAGATCACTTCTTTCTGCAGATTCCTCAATATCGCCACCACCACCACCACCACAACCTCATCAACACGGCCCAAACAACCACCACTAGTGCAGGTGGAAGCTCCATTAATATTTTCAATTCACAAAACTATAACAATGTTAATTCGCTTCAGCAGTATCAGCAGCTTCCTGCTCATGACTATGGCCTCCTCCAGGACATGCTTCCTTCTATGTTCCTCAAACAAGAGCCATAA 1206 0.476 MKELKRWPNAEENRIEVSQCNNVTASSMSMLTSAPHQHDKAAYRLRHVPGPVSATVKCRCRYRQGLFLDHNQQDTGGSTMYCEKNMFSSFPGSSAYDSSQTFDPSYMSFTECLQGTMDYNSLAASFGLSPSSSEVFSSVELEGNQKPAEAGDLGGGGGGSSETLATQNSSISSSSSEAGGEEDSGKTKKDSQVKGEEGGEGSKKGSKGRKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAGMFTPSMLTQTVTPTPLLAGSNFPQDHFFLQIPQYRHHHHHHNLINTAQTTTTSAGGSSINIFNSQNYNNVNSLQQYQQLPAHDYGLLQDMLPSMFLKQEP 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2141 401 ProSiteProfiles WRKY domain profile. 227 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2141 401 Pfam WRKY DNA -binding domain 233 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2141 401 MobiDBLite consensus disorder prediction 160 180 - -
Glsi11g2141 401 SUPERFAMILY WRKY DNA-binding domain 224 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g2141 401 Gene3D WRKY domain 217 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g2141 401 FunFam WRKY transcription factor 57 218 292 - -
Glsi11g2141 401 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 162 340 IPR044810 GO:0003700
Glsi11g2141 401 MobiDBLite consensus disorder prediction 137 226 - -
Glsi11g2141 401 SMART WRKY_cls 232 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g2141 401 MobiDBLite consensus disorder prediction 181 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2141 Glsi-ChrGlsi11 15045842 15048518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2141 85 401 WRKY Transcription Factor Family AT4G18170 47.546 2.34e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g2141 WRKY 1.9e-25 CL0274