Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2133 ATGCCAATATCACTCTGTATGAAGCATAAACATCTCAATTTCTCACTTTCATTGAATTATAGAGCCTTTCAGAAGTATAACAAAAGTGCTACAATGGCTGCTTCAACAATGGCTCTCTCTTCATCATTTGCTGGACAGGCAGTGAAACTTTCTCCCTCCACTCCTGAACTTGGCACGGGCCGGATCTCCATGAGGAAAACAGGTGGAAGGTCTGTTTCCTCTGGTAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCATCTTACTTGACCGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGACTTTCTGCTGACCCGGAGACCTTTGCCCGAAACCGTGAGCTTGAAGTCATTCACTGCAGGTGGGCTATGCTTGGAGCTCTGGGCTGTGTCTTCCCCGAGCTCTTGGCCCGCAATGGAGTCAAATTCGGTGAGGCTGTGTGGTTCAAGGCTGGAGCTCAAATCTTTAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGATCCACGCACAAAGCATCCTTGCCATCTGGGCAGTCCAAGTTATTTTGATGGGTGCTGTTGAGGGATACCGCATTGCCGGTGGACCACTGGGTGAGGTGACAGACCCATTGTACCCAGGTGGAAGCTTTGACCCATTGGGTCTTGCCGATGACCCAGAAGCTTTTGCTGAGCTGAAGGTGAAGGAGATCAAGAATGGAAGATTGGCCATGTTCTCGATGTTTGGTTTCTTTGTTCAGGCTATCGTGACCGGAAAGGGACCGTTGGAGAACCTCGCAGACCACCTTGCAGACCCAGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTGTCCCCGGAAAGTGA 885 0.5119 MPISLCMKHKHLNFSLSLNYRAFQKYNKSATMAASTMALSSSFAGQAVKLSPSTPELGTGRISMRKTGGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2133 294 FunFam Chlorophyll a-b binding protein, chloroplastic 85 287 - -
Glsi11g2133 294 MobiDBLite consensus disorder prediction 54 76 - -
Glsi11g2133 294 SUPERFAMILY Chlorophyll a-b binding protein 77 291 - -
Glsi11g2133 294 Pfam Chlorophyll A-B binding protein 94 260 IPR022796 -
Glsi11g2133 294 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 32 294 IPR001344 GO:0009765|GO:0016020
Glsi11g2133 294 Gene3D Chlorophyll a/b binding protein domain 85 287 - -
Glsi11g2133 294 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2133 Glsi-ChrGlsi11 15012212 15013482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2133 32 294 Chloroplast and Mitochondria Gene Families AT2G34430 87.970 2.57e-169 468