Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2132 ATGTCAGCCCAGTGCAATCGAATTAAAATCTTCTATCATTCCATGCTGATGTTATCTCGAAAGATCAGTTTGACTATAGTCATAGTCTTTTCTATTGTAGCTACAGTTTCATATGCAGAATCAAGCTTAGAAGTTGAAGTTGAAGCATTGAAAGCTTTCAAAAGCTCCATGACCCATAACCCAAATGGAGCACTTGCAGATTGGGTTGACAGCGCCCATCATTGCAACTGGTCTGGCATAGCTTGTGACCCATCTTCAAAGCATGTCATCTCAGTTTCTCTGGCTGGTCGGAGGCTCCGAGGCAAGATTTCGCCATTCCTGGGAAACATTTCAGGCCTCCAGGTTCTTGACTTAACTTCAAACTCTTTTTCTGGGTACATTCCTGCTCAGATAAGTCTTTGCTCCCAACTTTCTCAGCTAATACTAGTTGAAAACTCTCTCTCTGGTCCAGTTCCACCTGAGCTAGGAGACCTGAAAAATCTGCAGTATTTGGATCTGGGTTCTAACAATTTGAATGGAAGCCTCCCTGAGAGCATATTCAACTGCACCTCTTTGTTGGGTATAGCTTTCAACACTAACAACCTCAAAGGTACAATCCCATCAAACATAGGCAATCTTGTTAACCTTACACAAATTGCAGGATTTGGGAATCGCTTTGTTGGGTCTATTCCTTCTTCCGTAGGTAAATTGGTAGCTTTGCAATCTTTTGATTTTAGTCAAAACCAATTGTCTGGAGAAATACCTCGAGAGATTGGGAACCTGAGGAACTTAGAATATCTTGGGCTGTTTGAAAATTCGTTGGTTGGAAAAATTCCTTCTGAACTTGGTCAGTGTAAGAAGATAGTGAACCTTGAATTATACAGCAATCATTTTACTGGAACCATTCCTTTTGAGCTAGGAAATTTAATTCATCTGGAAACACTGCGTTTATATCTCAATGACTTCAATTCCACTGTTCCATCTTCCATATTCCAATTGAAATCGTTAACCCACTTAGGACTCTCGCAGAATCAATTAGAGGGAACAATATATTCTGAGATAGGATCTTTGAGATCAATGCAAGTTCTAACCCTGCATTCAAATAAATTTACTGGACAGATTCCTTCTTCAATAACAAACTTGACAAACTTAACTTATCTGTCAATGAGTCAGAATCTCCTTTCAGGTGAAATTCCTTCTGACATAGGAAAGCTTTATAATTTGAAGTTTCTAATCTTGAGCAACAACCTTTTCCATGGGTCCGTTCCCCCTAGCATTACCAATTGTACTAGTCTGACAAATGTAAGTTTATCTTTGAATGCAATAACTGGGAATATTCCTCAGGGCTTTTCAAGGTTTCCTAATCTTACCTTCCTGTCTCTTGCTTCCAACAAAATGTCTGGTGAAATCCCAGATGATCTCTTCAACTGCTCAAATCTTCATACTCTAAGTTTAGCAGAGAACAATTTTAGTGGGTTGCTCAAACCAGGTATCCAGAACCTCTTTAATCTCCGGATTCTGCAGATGAATATAAATTCATTCATGGGGTCGATTCCACCTGAGTTTGGAAACTTAAGTCAACTCGTCACTTTGTCCCTTTCTGATAATAGGTTTTCAGGTTACATTCCACCAGAACTATTCAAACTTACTCTCCTTCAGGGCCTCTACTTGCATGGGAATGCATTGGAAGGTACTATACCTGATCAACTCTTTGAACTAAAACAGCTCACTGAGCTTCTGCTGCATGAGAACAAGTTGGTTGGTCGAATTCCAAATGCTTTCTCAAAGCTTGAGATGCTTTCTTACTTAGACCTCCATGGAAACAAGTTTAATGGGTCCATTCCAAGAGGTATGGGGCAGCTTAGACAGCTCTTGATGTTGGATCTCTCCCACAACCACCTTATTGGGTCAATTCCTGGAGATGTCATTGCACATTTTAAAGGCATGCAGATGTATCTTAATCTCTCTCATAACCACTTCATTGCAACTATACCAGATGAGCTGGGTGGGTTGGAAATGATACAAGCCATTGATATTTCAAACAATAATCTTTCTGGTCCTATTCCTAAGACACTTTCAGGGTGCAGAAATCTATTCAATCTTGATCTTTCAGGAAACAACATCTCAGGTCCTATTCCTGGAGAAGCTTTCAGTCACATGGACTTGCTTCAGAACTTGAATCTTTCAAGGAACCATTTAGATGGTGAAATCCCGGACACCTTGTCAAAGCTTGAGCTTCTTAATTCCTTAGATCTTTCTCAGAATAACTTGAAGGGAACCATCTCGGAGGGCTTTGCCAATCTTTCCAACCTTATGCATCTCAACCTTTCTTTCAATCAACTTGAAGGTCACGTACCAGCAGATGGAATATTCTCACATACCAATGCAACTGAATTGATGGGAAACCCTGCTCTTTGTGGAGCCAAATTCCTACAGCCATGCAGGCAAACTGGTTCTCATTCACTATCCAAGAAGAGCATATCAATTATTGTAGCACTTGGATCTGTGGCTATTCTTTTATTTCTAGTGTTTGTAACTCTGTTTCTCAACCGACGCATCAAATTACAGAATCCTAATGAGATTGAGAATCCTGAACCAGATTACACTTCAGCTTTGACTCTCGAAAGATTTGATAGAAAGGACCTAGAAAATGCAACTGGTTTTTTCAGCACAGATAATATTATTGGGGCTAGCAGTTTGAGCACTGTTTACAAGGGTCAATTGCAAAATGGCCAGATAGTGGCAATAAAAACACTGAACTTGCATCAGTTTCCTGCAGAATCTGACAAGATCTTCAAGAGAGAAGTAAGCACCTTGAGCCAGCTGAGGCATAGGAATTTGGTTAAGGTACTTGGATATGCTTGGGAGAGTGGGAAAATAAAGGCTTTAGTTCTAGAGTACATGCAGAATGGGAATTTGGAGAGCATCATACATGATAAAGGGATGGATCAGACTAGGTGGACACTATCTGAAAGACTCAATATTCTCATTTCTGATGGTAGTTCTCTTTCCTCGTCAACAGCTTTCCAAGGCACTATTGGCTATTTGGCGCCTGAGCTTGCTTACATGAGGAAAGCAACGACCAAAGTTGATGTGTTCAGCTTTGGTATAATAGTAATGGAGTTTGTAACAAAGAGAAGGCCAACAGGGCTAACAGAAGAGGATGGCTTGCCAATGAGCCTCCGTGAAGTAGTGCAGAAAGCACTGGCAGACGGAAAGCAGCAGCTTCTTGAAGTTGTGGATCCTATGTTAGGCTGGAATGGGACTAAGGAGGATGAAGAAGTGCTGGCGGAGCTCTTCAAACTATCGTTTTGCTGTACCCTCCCTAATCCTGAAGATCGACCCAGTATGAATGAAGTATTATCTATCCTTATGATGCTGAAAACAGCAAGAAAGAACGGTGGAAAGAAACATTTAGTTGGAACAAATAGATACATATAA 3420 0.4056 MSAQCNRIKIFYHSMLMLSRKISLTIVIVFSIVATVSYAESSLEVEVEALKAFKSSMTHNPNGALADWVDSAHHCNWSGIACDPSSKHVISVSLAGRRLRGKISPFLGNISGLQVLDLTSNSFSGYIPAQISLCSQLSQLILVENSLSGPVPPELGDLKNLQYLDLGSNNLNGSLPESIFNCTSLLGIAFNTNNLKGTIPSNIGNLVNLTQIAGFGNRFVGSIPSSVGKLVALQSFDFSQNQLSGEIPREIGNLRNLEYLGLFENSLVGKIPSELGQCKKIVNLELYSNHFTGTIPFELGNLIHLETLRLYLNDFNSTVPSSIFQLKSLTHLGLSQNQLEGTIYSEIGSLRSMQVLTLHSNKFTGQIPSSITNLTNLTYLSMSQNLLSGEIPSDIGKLYNLKFLILSNNLFHGSVPPSITNCTSLTNVSLSLNAITGNIPQGFSRFPNLTFLSLASNKMSGEIPDDLFNCSNLHTLSLAENNFSGLLKPGIQNLFNLRILQMNINSFMGSIPPEFGNLSQLVTLSLSDNRFSGYIPPELFKLTLLQGLYLHGNALEGTIPDQLFELKQLTELLLHENKLVGRIPNAFSKLEMLSYLDLHGNKFNGSIPRGMGQLRQLLMLDLSHNHLIGSIPGDVIAHFKGMQMYLNLSHNHFIATIPDELGGLEMIQAIDISNNNLSGPIPKTLSGCRNLFNLDLSGNNISGPIPGEAFSHMDLLQNLNLSRNHLDGEIPDTLSKLELLNSLDLSQNNLKGTISEGFANLSNLMHLNLSFNQLEGHVPADGIFSHTNATELMGNPALCGAKFLQPCRQTGSHSLSKKSISIIVALGSVAILLFLVFVTLFLNRRIKLQNPNEIENPEPDYTSALTLERFDRKDLENATGFFSTDNIIGASSLSTVYKGQLQNGQIVAIKTLNLHQFPAESDKIFKREVSTLSQLRHRNLVKVLGYAWESGKIKALVLEYMQNGNLESIIHDKGMDQTRWTLSERLNILISDGSSLSSSTAFQGTIGYLAPELAYMRKATTKVDVFSFGIIVMEFVTKRRPTGLTEEDGLPMSLREVVQKALADGKQQLLEVVDPMLGWNGTKEDEEVLAELFKLSFCCTLPNPEDRPSMNEVLSILMMLKTARKNGGKKHLVGTNRYI 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2132 1139 Gene3D Transferase(Phosphotransferase) domain 1 985 1133 - -
Glsi11g2132 1139 Pfam Protein kinase domain 883 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2132 1139 Pfam Protein kinase domain 998 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2132 1139 FunFam Leucine-rich repeat receptor-like protein kinase 715 809 - -
Glsi11g2132 1139 Gene3D Phosphorylase Kinase; domain 1 847 960 - -
Glsi11g2132 1139 ProSiteProfiles Protein kinase domain profile. 882 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g2132 1139 Gene3D Ribonuclease Inhibitor 534 640 IPR032675 -
Glsi11g2132 1139 Gene3D Ribonuclease Inhibitor 247 341 IPR032675 -
Glsi11g2132 1139 Gene3D Ribonuclease Inhibitor 342 440 IPR032675 -
Glsi11g2132 1139 PANTHER UNNAMED PRODUCT 27 124 - -
Glsi11g2132 1139 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 43 197 - -
Glsi11g2132 1139 Gene3D Ribonuclease Inhibitor 35 96 IPR032675 -
Glsi11g2132 1139 Gene3D Ribonuclease Inhibitor 97 246 IPR032675 -
Glsi11g2132 1139 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 842 960 - -
Glsi11g2132 1139 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 198 297 - -
Glsi11g2132 1139 SUPERFAMILY L domain-like 45 315 - -
Glsi11g2132 1139 PRINTS Leucine-rich repeat signature 761 774 - -
Glsi11g2132 1139 PRINTS Leucine-rich repeat signature 740 753 - -
Glsi11g2132 1139 SUPERFAMILY L domain-like 268 562 - -
Glsi11g2132 1139 SUPERFAMILY L domain-like 488 828 - -
Glsi11g2132 1139 Gene3D Ribonuclease Inhibitor 641 815 IPR032675 -
Glsi11g2132 1139 SMART LRR_typ_2 374 397 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 590 613 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 614 638 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 446 470 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 158 182 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 713 736 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 302 326 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 566 589 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 254 278 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 761 786 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 398 422 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 688 712 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 230 253 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 737 760 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 350 373 IPR003591 -
Glsi11g2132 1139 SMART LRR_typ_2 518 542 IPR003591 -
Glsi11g2132 1139 SUPERFAMILY Protein kinase-like (PK-like) 859 1121 IPR011009 -
Glsi11g2132 1139 FunFam Leucine-rich repeat receptor-like protein kinase TDR 419 714 - -
Glsi11g2132 1139 Pfam Leucine rich repeat 352 410 IPR001611 GO:0005515
Glsi11g2132 1139 Pfam Leucine rich repeat 568 627 IPR001611 GO:0005515
Glsi11g2132 1139 Pfam Leucine rich repeat 669 726 IPR001611 GO:0005515
Glsi11g2132 1139 FunFam Leucine-rich repeat receptor protein kinase EMS1 319 418 - -
Glsi11g2132 1139 Gene3D Ribonuclease Inhibitor 441 533 IPR032675 -
Glsi11g2132 1139 Pfam Leucine Rich Repeat 160 182 IPR001611 GO:0005515
Glsi11g2132 1139 Pfam Leucine rich repeat N-terminal domain 46 83 IPR013210 -
Glsi11g2132 1139 SMART LRR_sd22_2 158 184 - -
Glsi11g2132 1139 SMART LRR_sd22_2 326 349 - -
Glsi11g2132 1139 SMART LRR_sd22_2 737 760 - -
Glsi11g2132 1139 SMART LRR_sd22_2 374 397 - -
Glsi11g2132 1139 SMART LRR_sd22_2 230 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2132 Glsi-ChrGlsi11 15007085 15012104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2132 36 1121 Receptor kinase-like Gene Family AT5G46330 50.480 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi11g2132 Pkinase 2.3e-09 CL0016