Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2130 ATGCAGAATCACAAATTTTTTCACCCTAAAAAGGTGGTGCTTCTTTCGGCAAATGAAGCAGTTAATACTTGTATGCATGCTCCACTTGCTTCTGCTTTTGATACAGTTCTACCTCCAGGTATGAGGCAGATAACACCTCTTGAAAGAGTTGAATTGCAGACTTCTGAGGCTTGCCCTAAGAATTTCTTTATCTTCGATCAGACAGATCACCAAAGCAGAATTATGTTCCATCCTGCAATGTCCTGCAAATTTAATGGGCCTGAATTCTATGTTAATGCGACTTGTACTCAGGGTTTTGAAAAGAACAAAGTAAATCAAACAGAAAGAGAATTATCATCTCCTTTTGAAGAAGATTCTGATGACATTGATGCACTGTTGAGTTTGCAGGGGGAGGAACTTGAAGACTGTGATGAGGAAGAAATCAGCACAGCAAGAACTCATGAAAATTATGAAAGTACAACTGATACTTGCTCCAGTTATTGCTCAAAATTAAGGAAGAATAGGGCATCATCTTCTGTACAGAAGTCTTCAAGGACTGGTGGTTATTGCGACAATGAAAGGAAGCACCAGGAAATGAAGAGGATGGTGAGGGTATTGAGAAGGATTGTGCCTGGTAGTAGTAACCAAATGGATTCCGTTGCTGTCTTAGATGGAGCTGTTAGATACCTGAAGTCTCTCAAGGTAGAAGTGGAGAATCTGGAAGCTATAAAAATGTAA 717 0.3975 MQNHKFFHPKKVVLLSANEAVNTCMHAPLASAFDTVLPPGMRQITPLERVELQTSEACPKNFFIFDQTDHQSRIMFHPAMSCKFNGPEFYVNATCTQGFEKNKVNQTERELSSPFEEDSDDIDALLSLQGEELEDCDEEEISTARTHENYESTTDTCSSYCSKLRKNRASSSVQKSSRTGGYCDNERKHQEMKRMVRVLRRIVPGSSNQMDSVAVLDGAVRYLKSLKVEVENLEAIKM 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2130 238 Gene3D - 184 237 IPR036638 GO:0046983
Glsi11g2130 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 226 IPR011598 GO:0046983
Glsi11g2130 238 PANTHER TRANSCRIPTION FACTOR BHLH145 23 235 IPR037546 -
Glsi11g2130 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 235 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2130 Glsi-ChrGlsi11 14997486 14998202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2130 1 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 38.492 5.42e-33 118