Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2115 ATGTTAACACGTCGACAAGGCCCATCTCCCTTTGGGCCCGACAGCAGAGGCAGTCATCGTTTTCAGTTAACCAGGTTTTCGCAGGAGCCGAAACGCCGAGTCCTCAACCCAAAAGCCTATTGTACGACCGCCATTGTTGCAACCATGTCAAGGAGAAAGGTTAGGGAGCCAAAGGAGGAAACTGTTACTCTTGGCCCAGCTGTCAGAGATGGCGAACATGCTTTTGGTGTGGCTCACATTTATGCCTCATTTAATGACACCTTCATTCATGTGACAGATTTGTCTGGGAGAGAAACCCTTGTCCGTATCACCGGTGGAATGAAGGTTAAAGCTGACAGGGATGAGTCTTCCCCATATGCTGCTATGCTTGCAGCACAGGATGTTTCTGCCAGATGCAAGGAACTTGGCATTACTGCTCTTCATATCAAGCTCCGCGCAACTGGTGGGAATAAGACAAAAACACCTGGTCCTGGAGCTCAGTCTGCTCTACGAGCCCTTGCCCGTTCTGGCATGAAAATTGGTCGGATAGAGGATGTAACTCCTATTCCATCCGATAGCACCCGCAGAAAGGGTGGTAGAAGAGGTAGAAGGCTTTAA 597 0.4958 MLTRRQGPSPFGPDSRGSHRFQLTRFSQEPKRRVLNPKAYCTTAIVATMSRRKVREPKEETVTLGPAVRDGEHAFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2115 198 ProSitePatterns Ribosomal protein S11 signature. 163 185 IPR018102 -
Glsi11g2115 198 MobiDBLite consensus disorder prediction 178 198 - -
Glsi11g2115 198 Pfam Ribosomal protein S11 76 194 IPR001971 GO:0003735|GO:0005840|GO:0006412
Glsi11g2115 198 Hamap 30S ribosomal protein S11 [rpsK]. 31 195 IPR001971 GO:0003735|GO:0005840|GO:0006412
Glsi11g2115 198 Gene3D Ribosomal protein S11 49 198 IPR036967 GO:0003735|GO:0005840|GO:0006412
Glsi11g2115 198 SUPERFAMILY Translational machinery components 72 196 - -
Glsi11g2115 198 FunFam 40S ribosomal protein S14 49 198 - -
Glsi11g2115 198 MobiDBLite consensus disorder prediction 1 28 - -
Glsi11g2115 198 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 51 193 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2115 Glsi-ChrGlsi11 14946222 14948996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2115 49 187 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 89.209 1.07e-90 260