Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2110 ATGTCATTTTCTTGTGCAAAAAACTTCTTCCAAAGGTTCTGGGTAGATGAATTCCAAATGGGAAGTTTTGCCCACAGCAGCTTTTTGTCTAATGATCTTCTGCCATCCCTTGGAGCCCGAATCAACCAGGAAACTAGACTCCGGAGATACATAATCTCCCCTTTCAATCCCTGGTATAGGGCTTGGGAGATGTTATTAATTATTCTGGTCATTTACTCAGCCTGGATTTGCCCGTTTGAGTTTGCCTTTCTGCCTTACAAGCAAGATGCACTATTTATCATCGACAACATTGTTAATGGCTTCTTTGCCATTGACATCATTCTGACATTCTTCGTTGCATATCTAGATAGCCAGTCTTACCTTCTCCTTGATGATCCCAAGAAAATCGCAATAAGGTACATATCTACCTGGTTTATTTTTGATGTCTGCTCAACGGCACCATTTCAGTCCATCAGCCTCCTCTTCACTAATCATAGCAGTGAGCTTGGCTTTAAACTGCTTAACATGCTACGATTATGGCGTCTGAGACGTGTTAGCTCTCTGTTTGCAAGACTTGAGAAAGACATCCGCTTCAATTATTTCTGGACTAGGTGCACGAAGCTCATTGCTGTAACCTTGTTTGCAGTACATTGCGCCGGATGCTTTAACTATCTGATTGCAGATAGATACCCTGATTCTAAAAGGACCTGGATTGGTGCAGTGTACCCAAATTTTAAAGAACAAAGTCTCTGGGACAGATATGTGACTTCAATATACTGGTCAATTGTCACACTTACAACTACTGGTTACGGGGATTTACATGCTGAAAACCCAAGAGAGATGATGTTTGATATCTTTTACATGCTGTTCAACTTGGGATTGACGTCATACATCATTGGAAACATGACAAACCTTGTAGTCCACTGGACCAGCCACACCAGGAACTTTAGAGATACAGTTCAAGCTGCTTCAGAATTTGCATCAAGAAATCATTTGCCCCACCACGTACAAGATCAAATGTTGTCACACTTATGTTTGAGATTTAAAACAGAAGGACTGAAGCAACAAGAAACATTAAATGGCCTGCCTAAGGCAATTCGTTCAAGCATTGCGTACCATCTATTTTTTCCCATTGTGCAGAAGGTCTACCTCTTCCAAGGAGTTTCCCATGACCTTCTTTTCCAACTGGTTTCAGAAATGGAAGCTGAGTATTTCCCACCCAAGGAAGAAGTAATACTGCAAAACGAGTCTCCTACAGACCTTTATGTACTGGTTTCAGGGGTGGTGGATCTTATTCGCTACATTGACGGGCAGGATCAAGTTCTCGAGAAAAGAATTGAAGGAGATGCATTTGGAGAGATTGGGGTTTTATACGATAGACCACAGCCTTTCACAGTTCGGACCACGGAGCTTTGTCAAATCTTAAGACTTAGCAGAACTTCATTAATGAATGCTGTACAAGCAAACCCAGAAGATGCACAAATTATGATGAATAATCTTTTCATGAGATTTAAGGGGCAAGAAGATATGGGCTTTGAATATTCACGCACAGATTCTGAACTGAATTTTCATGAAATCCTTGATGGAGGAACAAGAGGGAGCTCTTTTCATGCATGTACAAATAATGCACATGAAAATTCAATAATCAAGAAACGAAGGTACAGAGATTTCACAGACTCAGGGGAAGCTATTCATGATGCTGCAAAGAAAGGGCACCCAGATATGGTCGAAATACTGCTCCAAAGAGATGCTAATGCAAAGAATCCAAATGCCCTAGGATGGCCACCCAAAGTTCCAGAAGAGAAGCAAGAAAACAAAAGCATTTCTAACCTCTTAATGAGTGGTGAAAATAGAAAGAAATCAGATGAATGTACAACAGAGTTGGAGGCCACGAATGACCCAACCAGAAGCAGAAGATACGATGGTTCTAGGTCTATCAACTTCCCAACAGAAGAAGCATACACAAACTCCTATTCAAGTACTTCTAACGGTCCACGTGAAAGAAAAATGGCAAGATGCATCAAGAAGAGAGTTACAATCCACTTGCTATGCGAATACAGTAGCGCTTCACAGGGATATGGCAAGTTGATAATTCTACCTGATTCATTAGAAGAGTTGCTCAAGATTGCTGGTCAAAAGTTTGGAGGCTCCAAACCTACAAAAGTTATTAGTACAGAAAATGCAGAGATAGATGACATAAGTGTCATTCAAGATGGTGATCATCTCTTTCTTCTTTGCAGTAATAGTGAAAATTTGAGTTCATGA 2244 0.4069 MSFSCAKNFFQRFWVDEFQMGSFAHSSFLSNDLLPSLGARINQETRLRRYIISPFNPWYRAWEMLLIILVIYSAWICPFEFAFLPYKQDALFIIDNIVNGFFAIDIILTFFVAYLDSQSYLLLDDPKKIAIRYISTWFIFDVCSTAPFQSISLLFTNHSSELGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYPDSKRTWIGAVYPNFKEQSLWDRYVTSIYWSIVTLTTTGYGDLHAENPREMMFDIFYMLFNLGLTSYIIGNMTNLVVHWTSHTRNFRDTVQAASEFASRNHLPHHVQDQMLSHLCLRFKTEGLKQQETLNGLPKAIRSSIAYHLFFPIVQKVYLFQGVSHDLLFQLVSEMEAEYFPPKEEVILQNESPTDLYVLVSGVVDLIRYIDGQDQVLEKRIEGDAFGEIGVLYDRPQPFTVRTTELCQILRLSRTSLMNAVQANPEDAQIMMNNLFMRFKGQEDMGFEYSRTDSELNFHEILDGGTRGSSFHACTNNAHENSIIKKRRYRDFTDSGEAIHDAAKKGHPDMVEILLQRDANAKNPNALGWPPKVPEEKQENKSISNLLMSGENRKKSDECTTELEATNDPTRSRRYDGSRSINFPTEEAYTNSYSSTSNGPRERKMARCIKKRVTIHLLCEYSSASQGYGKLIILPDSLEELLKIAGQKFGGSKPTKVISTENAEIDDISVIQDGDHLFLLCSNSENLSS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2110 747 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Glsi11g2110 747 MobiDBLite consensus disorder prediction 609 633 - -
Glsi11g2110 747 ProSiteProfiles KHA domain profile. 670 747 IPR021789 -
Glsi11g2110 747 Gene3D Helix hairpin bin 301 367 - -
Glsi11g2110 747 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Glsi11g2110 747 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2110 747 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2110 747 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2110 747 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2110 747 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2110 747 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Glsi11g2110 747 ProSiteProfiles Ankyrin repeat profile. 552 584 IPR002110 GO:0005515
Glsi11g2110 747 Gene3D - 60 300 - -
Glsi11g2110 747 FunFam Potassium channel KAT3 61 301 - -
Glsi11g2110 747 Gene3D Jelly Rolls 370 503 IPR014710 -
Glsi11g2110 747 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Glsi11g2110 747 PANTHER POTASSIUM CHANNEL AKT1 25 613 IPR045319 GO:0005249|GO:0006813
Glsi11g2110 747 SUPERFAMILY cAMP-binding domain-like 304 494 IPR018490 -
Glsi11g2110 747 ProSiteProfiles Ankyrin repeat region circular profile. 552 578 - -
Glsi11g2110 747 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Glsi11g2110 747 Pfam KHA, dimerisation domain of potassium ion channel 669 737 IPR021789 -
Glsi11g2110 747 CDD CAP_ED 377 490 IPR000595 -
Glsi11g2110 747 SUPERFAMILY Ankyrin repeat 556 607 IPR036770 -
Glsi11g2110 747 FunFam Potassium channel KAT2 365 501 - -
Glsi11g2110 747 MobiDBLite consensus disorder prediction 607 637 - -
Glsi11g2110 747 SMART cnmp_10 377 494 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2110 Glsi-ChrGlsi11 14916257 14920037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2110 1 737 Ion Channels AT5G46240 61.134 0.0 902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2110 11 14916257 14920037 Glsi11g2110 11 14916257 14920037 ECH