Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2105 ATGGATGACATTCTGGAACGATATGAAAGACATTCGCGCACCGCGATAATTGCTGAATCTAACAATGAATTCCAGGGAGACTTGTCCTTGGAGCTATTCCGCCTCACTGCCCAGGTTGAGGTCTTGGAGAAGAAGATTAGGAACTATGAGGGACGAGATCTATATACCTTGAGTTTGAGAGAGCTTCAGAGTTTGGAGTGCCAGGTTGATGCTGCTCTGAGGCGCATTCGAACTAAAAAGAACCAACTCCTGAATGAGTCCATCTTAGAGATGCAGAGAAAGGCAAAGATGTTGGAAGTTGAAAACACCACATTGGAAAAGAAGGTGAAGGAGAAAGGCAAACAAAAGTTGGTGACGGAAGGGCGCAGACAAAAAATCTTTGATCGAAGTCTATTCAACTTCGACTTTTGTCCTCTAGAGCTTTCACCACTTCCACAACAAGAAGTGTCAGCTTTGACTTTAGGTGGACCTTCTCAGGCGGGAGGAGCCGTGGCAGAGGCTGAAGCCGGAAATGCTCCCAGTTGCAGCATTGTCATGCCACCGTGGATGCTGCATCATTTAACTAGATAG 570 0.4632 MDDILERYERHSRTAIIAESNNEFQGDLSLELFRLTAQVEVLEKKIRNYEGRDLYTLSLRELQSLECQVDAALRRIRTKKNQLLNESILEMQRKAKMLEVENTTLEKKVKEKGKQKLVTEGRRQKIFDRSLFNFDFCPLELSPLPQQEVSALTLGGPSQAGGAVAEAEAGNAPSCSIVMPPWMLHHLTR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2105 189 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Glsi11g2105 189 Coils Coil 62 115 - -
Glsi11g2105 189 Coils Coil 32 52 - -
Glsi11g2105 189 Pfam K-box region 26 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2105 Glsi-ChrGlsi11 14880694 14883968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2105 1 188 MADS-box Gene Family AT5G60910 37.895 1.55e-27 100