Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2087 ATGACAATCGGAAGTCTTGCTCCTAACACGGAGAAGAAAAGATCACGAAAGAGCAAAGCAGTTGTTAATGAGAATGCACCCTTATTACCTAAAAGGCAAGAGGAAGATGCTGGGTTTGATGATTTTGATGGAGGTTCATTCTCCGGGGCTGTTTTTAACTTATCCACCACAATCATTGGTGCGGGGATCATGGCTTTGCCTGCAACCTTTAGAGAATTAGGGATGGTGGCTGGGATTGCTGTGATCATCTTCATGGCTTTATTGACAGAAAAGTCCATTGAGATGTTGATTAGGTTCACCCGGGCAGGGAAGGCTGTCTCTTATGGAGGTCTAATGGGGGATGCCTTCGGAAAATATGGAAAAGCTCTGGTGCAAATTTGTGTTATAGTCAACAACCTTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTTTCTGGAACATCAAGTAGCGATCACCATGCTGGTATCCTTGAAGGATGGTTTGGTGCACACTGGTGGACTGGGCGTACATTTGTTGTTCTTTTTACAACGCTTGCTATATTTGCACCTCTGGCAAGCTTTAAACGAATTGATTCATTGAGATTCACATCAGCCCTATCAGTTGGACTTGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATTTCAGTTGTCAAGATCATCGGTGGAGGAATTGAAATGCCCAAACTGTTCCCTGTCATTACTGATTTGACATCATTTTTTAAACTGTTCACTGTAGTTCCTGTGCTCGTCACTGCCTATATCTGCCACTACAACGTTCACAGCATAGACAATGAACTTGAAGACTCATCACAGATGCAAGGGGTTGTACGTTCTGCCCTTGTTCTATGTTCTTCAGTGTATCTTATGACAAGCTTCTTTGGGTTCCTATTATTTGGTGATGGAACTCTTGATGATGTGCTTGCCAACTTCGATACTAATCTCGGAATTCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTTTCAGCTATGCTGCACACCTCATGCTTGTATTTCCAGTTGTCTTTTATCCTCTGCGGCTCAACATAGATGGTCTCCTATTTTCCTCATCCAGGCCTTTGGTTCTGGATAACTTTAGATTTGCATCAATCACTATTGCCCTCGTCGGTGTTATCTTCCTGGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACAGCTGCAGTTTGCCTAGGATTCATATTTCCAGCTGCCATTACTCTTAGGGATAAGTACAAAATAGCAACCAAAACAGACAAGATTTTGTCCGTCCTTATGATTGTTCTGGCAGTCTTCTCAAATCTTGTGGCTATATACAGTGATGCCTATGCCTTGTTGAAGAAGAATAAAACGTCCCGTCAATGA 1389 0.4262 MTIGSLAPNTEKKRSRKSKAVVNENAPLLPKRQEEDAGFDDFDGGSFSGAVFNLSTTIIGAGIMALPATFRELGMVAGIAVIIFMALLTEKSIEMLIRFTRAGKAVSYGGLMGDAFGKYGKALVQICVIVNNLGVLIVYMIIIGDVLSGTSSSDHHAGILEGWFGAHWWTGRTFVVLFTTLAIFAPLASFKRIDSLRFTSALSVGLAVVFLVIAVGISVVKIIGGGIEMPKLFPVITDLTSFFKLFTVVPVLVTAYICHYNVHSIDNELEDSSQMQGVVRSALVLCSSVYLMTSFFGFLLFGDGTLDDVLANFDTNLGIPFGSVLNDAVRFSYAAHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLDNFRFASITIALVGVIFLGANFIPSIWDAFQFTGATAAVCLGFIFPAAITLRDKYKIATKTDKILSVLMIVLAVFSNLVAIYSDAYALLKKNKTSRQ 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2087 462 PANTHER AMINO ACID TRANSPORTER 43 441 - -
Glsi11g2087 462 MobiDBLite consensus disorder prediction 1 26 - -
Glsi11g2087 462 Pfam Transmembrane amino acid transporter protein 45 448 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2087 Glsi-ChrGlsi11 14778654 14781185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2087 3 457 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.421 0.0 633