Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2076 ATGATGACTTCAAAAGAAGCATATTTTACAATACAAGCTCAGGAAGGAAATTCAAGTGATCGTGAGAAAGAAATGGTTTCAACACAATGGATAAGATTGAGGGATCCAAGAGTGGTGAGTGTGTCGAACGAGTATGGAGTAAAAGACAGGCACAGCAAGGTGTGCACAGTGAAAGGACTGAGAGACAGGCGAGTAAGGCTGTCAGTAACCACTGCTGTTCAACTATTTGATCTTCAACATAGGCTAGGCTTCAAGCAGCCCAGCAAGGCCATTGATTGGTTGCTTGCTGCTGCTAAGAAAGAAATTTATGAACTCCCACCTCTCCCAATTTCACAACTTAACACGTGCTTTAATCATCCAGCTATAATTTCTCCTAGTCAAATTTACACCTCTCACCCTATTAATCAACAACGATTTGGTACACTCCTCAATGAGAGTAGTAGAATTCATGATTGGGGAGCTGGCTCTGGTTCAAGTTCCAGAAATCATGCTTTCGCTTCTGTAGAAATGGTTTCTGAGGAAGCAAGTTGGACAGGTGTAGATGATGATGAGGTTAGACAAGGAGAAGTTTTCACAAGTTTGTCGACTGGGACTACTTGTGCTATTCCGCCTCTTGGATCAACACACGACTCCCATAACTTCCCTTCCGCAATGGTCATGAAACCCAGGGAAATCAACCACTATCATGAGATGCTGGGCTCGAATTCTGTGGGTCCATCTCTATACCCTATGAGTAGCCAATCTTTGAACCCCTTCGGCTTGGGTGATCCCGAACTTGTCCATTCACGAAACCGCAGTGAAAGCCTGCAGTCTCACGAAGACCATATGATTTTCTCTCAAGAATGTGATCCTACACAAAACTACTGCTTCACTAAATAA 879 0.4357 MMTSKEAYFTIQAQEGNSSDREKEMVSTQWIRLRDPRVVSVSNEYGVKDRHSKVCTVKGLRDRRVRLSVTTAVQLFDLQHRLGFKQPSKAIDWLLAAAKKEIYELPPLPISQLNTCFNHPAIISPSQIYTSHPINQQRFGTLLNESSRIHDWGAGSGSSSRNHAFASVEMVSEEASWTGVDDDEVRQGEVFTSLSTGTTCAIPPLGSTHDSHNFPSAMVMKPREINHYHEMLGSNSVGPSLYPMSSQSLNPFGLGDPELVHSRNRSESLQSHEDHMIFSQECDPTQNYCFTK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2076 292 MobiDBLite consensus disorder prediction 1 21 - -
Glsi11g2076 292 ProSiteProfiles TCP domain profile. 47 105 IPR017887 -
Glsi11g2076 292 Pfam TCP family transcription factor 48 109 IPR017887 -
Glsi11g2076 292 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 180 IPR005333 GO:0003700
Glsi11g2076 292 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2076 Glsi-ChrGlsi11 14568901 14569779 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2076 30 119 TCP Transcription Factor Family AT3G02150 70.330 2.87e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi11g2076 TCP 1.4e-28 No_clan