Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2072 ATGGAGGAGGATGAGATTCAAGCACAAGCGTGTAAATTCCCAAGAGTTGGAAATGGCAGAAATGACTCCAACAAGATAGGTTCTAAAGGAAGTGAGCAATTCCCAGTCGACCAAGCAGATGGCAGCACAAATCGGTTCCATAGTTGGCACCATTCTTCAAGAATCATTAGGGTTTCGCGAGCATCTGGTGGGAAAGATCGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACCGAAGGGTTCGGCTCTCTGTAACAACAGCAATCCAGTTCTATGATCTCCAAGATAGGCTTGGCTATGACCAACCAAGTAAAGCTGTAGAGTGGCTAATCAAAGCAGCTGCTGATTCCATTTCAGAGCTTCCTTCTCTGAATAATACATTCCCTGATACTCCCAAGCGACCAAGCGATGAGAAAAGGGGAAATGTGGGGACCGGACGAGGCTTTGATTCAGCTGATGCAGAGCTAGAAGGTGAGACCAATTATCAGCAGACCCAAAGTCAAAACATTTCCTTGTCCAAATCTGCTTGTAGCAGCACTTCAGAGACAAGCAAAGGCTCTGGCTTGTCCCTCTCAAGATCCGAGATTCGTGTGAACCGTGTCAAGGCCCGCGAGAGAGCAAGGAAGAGAGCAGCAAAGGAGAAGGAGAAAGAGAACGAATCTCGTATTGCCCATCACCAGAATGTGAACTCCATTTCTCAAACTGCTTCTTTCACTGAGCTTCTCACAGGTGGGATTAGTAGTACTGTTCCTACTAATACCAGTCCCACTGGATCAGTTCACCAGAATCATCCTGGTGATGAGCATGATTTATTCAACAAGGCAGCAAGACAGCAATGGTCAACAACACCCATGGACTACTTTAGCTCAGGACTTGTCGGGCCGTCCTCTTCAAGAACCCCTCATCAATCTTCTGGGTTCTCACGACAAATACAAATAGGAAATTCCCTTCCCCAGGCAATGTCTGTTTCACCATTCAATGTCACGGGTGAAAATCACTCAGATCAGTTGCAGCATTTCTCCTTTATTCCTGACCATCTTATACCAGCTGTGGTTACTTCGCAGCCCGACTACAATCTCAACTTTACCATCTCTTCAGGCCTTGCTGATCCAATGTACCTTTCTTCATAG 1134 0.4638 MEEDEIQAQACKFPRVGNGRNDSNKIGSKGSEQFPVDQADGSTNRFHSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADSISELPSLNNTFPDTPKRPSDEKRGNVGTGRGFDSADAELEGETNYQQTQSQNISLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARKRAAKEKEKENESRIAHHQNVNSISQTASFTELLTGGISSTVPTNTSPTGSVHQNHPGDEHDLFNKAARQQWSTTPMDYFSSGLVGPSSSRTPHQSSGFSRQIQIGNSLPQAMSVSPFNVTGENHSDQLQHFSFIPDHLIPAVVTSQPDYNLNFTISSGLADPMYLSS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2072 377 MobiDBLite consensus disorder prediction 210 225 - -
Glsi11g2072 377 ProSiteProfiles TCP domain profile. 64 122 IPR017887 -
Glsi11g2072 377 MobiDBLite consensus disorder prediction 122 233 - -
Glsi11g2072 377 MobiDBLite consensus disorder prediction 158 195 - -
Glsi11g2072 377 MobiDBLite consensus disorder prediction 1 48 - -
Glsi11g2072 377 MobiDBLite consensus disorder prediction 246 270 - -
Glsi11g2072 377 MobiDBLite consensus disorder prediction 21 48 - -
Glsi11g2072 377 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 40 312 IPR005333 GO:0003700
Glsi11g2072 377 Pfam TCP family transcription factor 63 218 IPR017887 -
Glsi11g2072 377 ProSiteProfiles R domain profile. 198 216 IPR017888 -
Glsi11g2072 377 MobiDBLite consensus disorder prediction 246 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2072 Glsi-ChrGlsi11 13134155 13135367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2072 44 367 TCP Transcription Factor Family AT4G18390 45.970 1.06e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi11g2072 TCP 1.6e-40 No_clan