Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2062 ATGAGGAGGAATTGCAACTTGGAACTTCGCCTTTTCCCTTCCTACGATCCCGGCCATACCAACCACTACCCCCACCACCCAATGATGGAAGAAGCCAGTAGTGAAAGCGGACAGCAACAGCTGCAGAAGCTGACCATTTTCTACGATGGGAAGATTTGTGCTTGTGATGTAACGGAGCTTCAGGCTAGATCCATCTTGATGCTTGCAAATAAGGAATTGGAGGAAAGGGTGAGGACACCAAATGGGTCGGAGCCATCTTCCCCAACACTGCCATTGTATAGTCCAAGCACTGGCCTTTCTATGAAAAGATCGCTGCAACGGTTCCTCCAGAAGAGAAAGAATCGGATCCAAGAAGCTTCCCCGTACAATCATTAG 375 0.488 MRRNCNLELRLFPSYDPGHTNHYPHHPMMEEASSESGQQQLQKLTIFYDGKICACDVTELQARSILMLANKELEERVRTPNGSEPSSPTLPLYSPSTGLSMKRSLQRFLQKRKNRIQEASPYNH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2062 124 MobiDBLite consensus disorder prediction 76 99 - -
Glsi11g2062 124 Pfam tify domain 39 70 IPR010399 -
Glsi11g2062 124 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 26 123 IPR040390 -
Glsi11g2062 124 SMART tify_2 37 71 IPR010399 -
Glsi11g2062 124 ProSiteProfiles Tify domain profile. 37 71 IPR010399 -
Glsi11g2062 124 MobiDBLite consensus disorder prediction 80 99 - -
Glsi11g2062 124 Pfam Jas motif 102 122 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2062 Glsi-ChrGlsi11 13076734 13078090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2062 1 122 Tify Gene Family AT1G30135 44.961 1.73e-27 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi11g2062 tify 1.8e-11 No_clan