Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2043 ATGACTACCTTTTCTTTTAAGGTCCAATGGGATGCTGTGCATTTCGGGTTTTTGTCTGTATGGCTTTTCCTCTTATATGCAAATGGTAGCACAAGGGCCTATATATACGTGTATGTGCACGCTTCTGCTGAACAAAAGCTGAAGCAAGCTTTGCCTTATTTTGAACTCTGCGTGAGTTGGTTTTGGAGTGGGAGAGCACCAATGGCTGTCTTCATGGCAATTATAGGTGTGGTCTTGGCGCTCTGTTTTTGCTCTGCCCTCTTGAGGTGGAACGAAGTGAGGTACAGGAAGAAAGGTTTGCCTCCAGGCACAATGGGTTGGCCAGTCTTTGGAGAAACAACTGAGTTTCTTAAGCAAGGTCCAAACTTTATGAAAACCCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCTCACATACTGGGCTGTCCTACCATTGTGTCCATGGATGCAGAGCTTAATCGATACATCTTAATGAATGAAGCAAAAGGGCTTGTTCCTGGATACCCACAATCCATGTTGGATATCTTAGGCAAATGCAATATTGCAGCTGTTCAAGGCACCGCCCACAAGTACATGAGAGGGGCACTACTATCCATCATTAGCCCCACCATGATCAGAGATCAGCTTTTGCCAAAAATTGACGAGTTCATGAGAACCCACCTAAGCAATTGGGGGAGCAAAGTCATTAACATTCAAGAGAAAACCAAAGAGATGGCCTTTCTCTCATCTTTAAAGCAAATTGCTGGCGTCGAATCTAGCTCCATATCTCAACAATTCATGGCAGAGTTCTTTAAGCTAGTTTTAGGAACCTTATCCCTGCCTATTGACCTTCCTGGCACCAATTATCGCCGTGGATTCCAGGCAAGGAAGAATATTGTCAGCATTCTGAAGCAGCTGCTGGAGGGAAGAAGAGTTTCCCAGGAAACACACGTAGACATGCTCGGTTGCCTGATGAGAAATGAAAGTCGATATAAGCTCACTGATGAAGAAATCATTGATCTGATAATTACGATTATGTATTCTGGGTATGAAACTGTTTCAACTACATCAATGATGGCCGTAAAGTACCTCCATGACCATCCCAAAGTTCTTGAAGAACTGAGAAAAGAGCATTTGGCCATAAGAGAGAGGAAAAAGCCAGATGATCCAATTGACTGTAACGATCTCAAATCTATGAACTTTACTCGTGCGGTGATTTTTGAGACCTCGAGATTGGCCACAATAGTTAACGGGGTTTTAAGAAAAACCACTCAGGACATGGAAGTAAATGGCTATTTGATTCCCAAAGGATGGAGAATCTATGTATATACAAGAGAGATTAATTATGATCCATTTCTGTATTCCGACCCACTGACGTTTAACCCATGGAGATGGCTGGATAAGAGCATAGAATCACAGAGCTACTTTTTGATATTTGGAGGAGGCACCAGGCAGTGTCCAGGAAAAGAGTTGGGAATGGCAGAAATTTCCACTTTCTTACACTATTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTAACGAAATTCCCTCGAGTCGAAGCGCCAAATGGGCTGCACATAAGGGTGTCATCATGCTAA 1590 0.4296 MTTFSFKVQWDAVHFGFLSVWLFLLYANGSTRAYIYVYVHASAEQKLKQALPYFELCVSWFWSGRAPMAVFMAIIGVVLALCFCSALLRWNEVRYRKKGLPPGTMGWPVFGETTEFLKQGPNFMKTQRARYGSFFKSHILGCPTIVSMDAELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVQGTAHKYMRGALLSIISPTMIRDQLLPKIDEFMRTHLSNWGSKVINIQEKTKEMAFLSSLKQIAGVESSSISQQFMAEFFKLVLGTLSLPIDLPGTNYRRGFQARKNIVSILKQLLEGRRVSQETHVDMLGCLMRNESRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLEELRKEHLAIRERKKPDDPIDCNDLKSMNFTRAVIFETSRLATIVNGVLRKTTQDMEVNGYLIPKGWRIYVYTREINYDPFLYSDPLTFNPWRWLDKSIESQSYFLIFGGGTRQCPGKELGMAEISTFLHYFVTRYRWEEVGGDKLTKFPRVEAPNGLHIRVSSC 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2043 529 SUPERFAMILY Cytochrome P450 94 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PANTHER CYTOCHROME P450 26 97 507 - -
Glsi11g2043 529 Pfam Cytochrome P450 101 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 FunFam Cytochrome P450 85A1 91 528 - -
Glsi11g2043 529 CDD CYP90-like 127 527 - -
Glsi11g2043 529 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Glsi11g2043 529 Gene3D Cytochrome P450 91 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g2043 529 PRINTS E-class P450 group I signature 128 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2043 Glsi-ChrGlsi11 12910514 12914120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2043 148 527 Cytochrome P450 AT5G38970 70.157 0.0 568