LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g2039	ATGAGACTAGTCATCTCAGCTGTCTGTGTGCTTGTGCTGCTTTCTTATGCAGCTGCTTATGATCCTTTGGATCCAAATGGAAACGTAACGATCAAATGGGATGTCATGTCTTGGACCCCAGATGGCTATGTGGCGGTAGTAACAATCCACAATTTCCAAATGTTTCGGCACATAATGAATCCTGGATGGACGTTAGGATGGTCATGGGCTAAGAAAGAAGTGATATGGTCCATGGTAGGGGCTCAAACCACAGAGCAAGGGGACTGCTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACTGTTGTAGACTTGCTCCCTGGTGTACCTTACAACCAACAATTCTCTAACTGCTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGATCCTTCAGCAGCTATCTCATCCTTCCAGTTGAGTATTGGCCAAGCAGGCACTTCAAACAAGACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCTGGACCAGGCTATACTTGTGGCCCTGCCAAGATTGTCCCTTCCACCACTTTCCTTACACAGGACCGGCGCCGGAAGACTCAGGCACTAATGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCGAGAAAGAACCCAAGTTGTTGCGTCTCTTTGTCATCCTTCTACAATGAAACCATTACGCCTTGCCCCTCCTGTGCATGTGGGTGCCAGAACAAGAAGAACTGTGTCAAGAGTGACTCTAAAATTCTGAGCATGGTGGGAGCACACACTCCAAAGAAAGACAATGAACCACTCTTACAATGTACGCATCATATGTGCCCAATCAGGGTACACTGGCATGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGATAGCCGTAACAAATTTCAATTACAGAATGAATTACTCCCTTTGGACTCTTGCTGTCCAGCACCCAAATCTTAACAACATCACCCAAGTTTTCAGTTTTGGTTACAAGCCTCTGGGTGCCTACGAGTCCATAAATGACACTGGTATGTTTTATGGCACGAAGTACTATAATGATCTGTTAATGGAAGCCGGAGCAGCTGGCAACGTTCAGTCAGAGGTGCTTCTCCAGAAGGACAAGGATACTTTCACCCTGAATCAGGGGTGGGCATTTCCCCGCAAGGTCTATTTTAATGGTGACGAATGCATGCTTCCCCCACCAGATACATACCCATTTCTCCCTAATTCTGCCCCTGTAAATCCACTCACGTTCCCAGCATTCATCTTTTCATTGCTTTTCCTGGTAGCTGTTTGGTGA	1296	0.466	MRLVISAVCVLVLLSYAAAYDPLDPNGNVTIKWDVMSWTPDGYVAVVTIHNFQMFRHIMNPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAISSFQLSIGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTTFLTQDRRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKSDSKILSMVGAHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYRMNYSLWTLAVQHPNLNNITQVFSFGYKPLGAYESINDTGMFYGTKYYNDLLMEAGAAGNVQSEVLLQKDKDTFTLNQGWAFPRKVYFNGDECMLPPPDTYPFLPNSAPVNPLTFPAFIFSLLFLVAVW	431

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g2039	431	PIRSF	COBRA	1	431	IPR006918	GO:0010215\|GO:0016020
	Glsi11g2039	431	PANTHER	PROTEIN COBRA	7	424	IPR006918	GO:0010215\|GO:0016020
	Glsi11g2039	431	Pfam	COBRA-like protein	43	206	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g2039	Glsi-ChrGlsi11	12883405	12885499	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g2039	19	427	COBRA Gene Family	AT3G29810	68.689	0.0	616