Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2038 ATGACACCTTTCAGCTCATGGTACTACTATAAACTTTGCATCTTCAAGCTCTGTATCTTAATTAATTTCACTCAATTCTGCAGGCTAGATCAAACTAAGTTCTATGTTATAGGAGCTGGACTCTTTACAGGTGTTACAGTGGCACTCTACCCAATTTCTGTTGTGAAAACTAGGCTACATGTTGCTTCAAAGGATACTATAGAGAGAAATGCATTTTCTGTTATTAAAGGATTGATTAAAACAGATGGTTTTCCTGGTTTGTATAGAGGGTTTGGCACAGTTATCGCTGGTGCAATTCCTGCCAGAATCATATTCCTCACTGCCCTAGAGACCACGAAGGTGGCTGCCTTTAGGATGTTGGAACCGTTTAGACTCTCTGAAACTACCCAGGCAGCCATAGCAAATGGAGTTGCAGGCATGACATCATCACTTTTTTCTCAAGTTGTGTTTGTTCCAATTGACGTGACTCACAGACAGGCATACACATATATATGGCTAGCCAAAAGTGAATGGTGCAAGGATACTCGGGCCATGCTCAGTATAGTGGGGGCTTGGATGTTGCCCGTAAGGTTTGAGCCACCGCTTTATTTGGAGGTGAGGCATGGACAGTCAACACCTGGTTGCAAGGGCAGACTCTTGGGACATCATGTGGAATATGGGGAAGGCAATCCTGGAGTGCAGAAGGTTATGTTAGTTCAGGCTAGTGGAGGAATTATTGCTGGTGTAACTGTATCCTGCATTACAACACCATTGTACACTATTAAAACGCGATTACAGGTGATGGGATATGAAAATAGAAGTTCTCTGAAACAAGTTGTTAAAGAATTATATAGAGGATTAGGTCCACGATTTTTCAGCATGTCAGTGTGGCACAAGTCATTGCTAGCATGCCAAGTCAACAGCACTATCAACCAGAACCACAAGGAAACATTTGTTTTGCTCAACCTATGGAGTTTGAGAAGTAAAATTCATATGAGGCTCATTGAGCACTTGCACAGCCAGACTAGACTACAACAGTGGACCATAAAGGAGGAGGATACAACCAACTGA 1050 0.4248 MTPFSSWYYYKLCIFKLCILINFTQFCRLDQTKFYVIGAGLFTGVTVALYPISVVKTRLHVASKDTIERNAFSVIKGLIKTDGFPGLYRGFGTVIAGAIPARIIFLTALETTKVAAFRMLEPFRLSETTQAAIANGVAGMTSSLFSQVVFVPIDVTHRQAYTYIWLAKSEWCKDTRAMLSIVGAWMLPVRFEPPLYLEVRHGQSTPGCKGRLLGHHVEYGEGNPGVQKVMLVQASGGIIAGVTVSCITTPLYTIKTRLQVMGYENRSSLKQVVKELYRGLGPRFFSMSVWHKSLLACQVNSTINQNHKETFVLLNLWSLRSKIHMRLIEHLHSQTRLQQWTIKEEDTTN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2038 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 115 IPR018108 -
Glsi11g2038 349 Pfam Mitochondrial carrier protein 232 287 IPR018108 -
Glsi11g2038 349 Pfam Mitochondrial carrier protein 40 114 IPR018108 -
Glsi11g2038 349 SUPERFAMILY Mitochondrial carrier 30 290 IPR023395 -
Glsi11g2038 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 212 294 - -
Glsi11g2038 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 304 IPR018108 -
Glsi11g2038 349 Gene3D Mitochondrial carrier domain 207 308 IPR023395 -
Glsi11g2038 349 Gene3D Mitochondrial carrier domain 19 181 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2038 Glsi-ChrGlsi11 12873178 12878713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2038 28 295 Chloroplast and Mitochondria Gene Families AT5G15640 53.979 8.90e-96 285