Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2020 ATGGGAGAGAAAAGAAGCACGGGGTTGCAAGGGAAGTGTGAATCACATTCAGATCCAGACACTGCATGTAGGGCAACTAGGGCAATGCAAGTCCAAAAGAGCCATCATCATGTTCTTCATCATCACTTGCCACCTTTTATAGCCATGAAGAGAAGACAGATCTTTGTTCATGTGGCCCTGGTTTTGTTTATGGTCATAGTTGAAGCAGCTGCAGGAGGAAGAGAAGCTGATAGGATTTTGGAACTCCCGGGGCAACCAAAAGTCTCCTTTCTGCAGTTCTCTGGCTATGTCACTGTTAATCAGGTTGCTGGGAGAGCCCTCTTTTACTGGCTCACTGAAGCGGCTCAAAACCCTTCCACCAAACCCCTCGTCATTTGGCTCAATGGAGGTCCGGGTTGTTCATCCGTGGCATATGGTGCGTCTGAGGAGATTGGCCCATTTAGAATAAACAGAACAGCTTCGGGGCTATACCTTAACAAGTTCTCTTGGAACACCGTGGCCAACCTTCTATTCTTGGAAACTCCGGCCGGCGTTGGCTTCTCCTACTCCAACCGGTCCTCCGATCTGCTTGACACCGGCGATCGTCGAACTGCCAGAGACTCTCTGGAATTCATAATCAGATGGCTAGATCGATTCCCAAGTTATAAGAATCGTGAACTTTATATCACTGGGGAGAGCTATGCAGGCCATTATGTGCCTCAATTAGCAAAGGAAATCGTGATGTATAACACAAAAGCGAAGCACCCCATCAATCTCATAGGGATAATGGTTGGGAATGCAGTGACGGACAACTACTATGATAATTTAGGCACAGTGACGTACTGGTGGAGCCATGCTATGATCTCTGATCAGACTTACCGGCAACTCATCAACACTTGTGATTTCCATCGCCAAAAGGAATCCGATCAGTGTGAGTCCTTGTATAGTTACGCCATGGATCAAGAATTTGGCAACATTGATCAGTACAACATCTATGCACCTCCATGCAACAACTCCGATGGCACCAGCTCCGCCGCCACCCGCCACTCCATGCGCTTGCCTCACCGCCCTCGTCTTCCGATATTTAGGCAAATGTCTGGGTATGATCCGTGTACGGAAAAGTATGCTGAGATATACTACAATAGGGCAGATGTTCAGAAAGCACTCCATGCAAACACAACCGGCATTTCTTACAAGTGGACTTCTTGCAGTGAGGTTTTGAATCGGAACTGGAATGATACAGATGTATCTGTTCTTCCAATTTATAGAGAATTGATAGCACATGGAATAAGAGTTTGGGTTTTCAGTGGGGACGTCGATTCAGTGGTGCCAGTTACGGCAACAAGGTATTCGCTTGCACAGCTCAAGTTGGCAACCAAAATCCCATGGTATCCTTGGTATGTTAAGAATCAGGTTGGAGGGTGGACAGAGGTATATGAAGGGGTGACGTTCGCCACTGTTAGAGGAGCAGGTCATGAAGTCCCACTATTCAAGCCCAGAGCAGCCCTCCAGTTATTCAAATCATTTCTAGTAGGAAAACCTCTTCCAAAGAATCAAGGGCTTCTCTTACGCATATTCATTCTGGATTTTGATTGTGCTGTAGTGGAGGATTCTAAAGGAGCAAGTACCAATTCGGTTGAATCTTAA 1626 0.4662 MGEKRSTGLQGKCESHSDPDTACRATRAMQVQKSHHHVLHHHLPPFIAMKRRQIFVHVALVLFMVIVEAAAGGREADRILELPGQPKVSFLQFSGYVTVNQVAGRALFYWLTEAAQNPSTKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFSWNTVANLLFLETPAGVGFSYSNRSSDLLDTGDRRTARDSLEFIIRWLDRFPSYKNRELYITGESYAGHYVPQLAKEIVMYNTKAKHPINLIGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLINTCDFHRQKESDQCESLYSYAMDQEFGNIDQYNIYAPPCNNSDGTSSAATRHSMRLPHRPRLPIFRQMSGYDPCTEKYAEIYYNRADVQKALHANTTGISYKWTSCSEVLNRNWNDTDVSVLPIYRELIAHGIRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKNQVGGWTEVYEGVTFATVRGAGHEVPLFKPRAALQLFKSFLVGKPLPKNQGLLLRIFILDFDCAVVEDSKGASTNSVES 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2020 541 SUPERFAMILY alpha/beta-Hydrolases 75 509 IPR029058 -
Glsi11g2020 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Glsi11g2020 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 475 488 IPR001563 GO:0004185|GO:0006508
Glsi11g2020 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
Glsi11g2020 541 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Glsi11g2020 541 FunFam Carboxypeptidase 360 508 - -
Glsi11g2020 541 ProSitePatterns Serine carboxypeptidases, histidine active site. 475 492 IPR033124 GO:0004185
Glsi11g2020 541 Pfam Serine carboxypeptidase 84 504 IPR001563 GO:0004185|GO:0006508
Glsi11g2020 541 Gene3D - 364 401 - -
Glsi11g2020 541 Gene3D alpha/beta hydrolase 73 331 IPR029058 -
Glsi11g2020 541 FunFam Carboxypeptidase 73 331 - -
Glsi11g2020 541 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Glsi11g2020 541 FunFam Carboxypeptidase 411 505 - -
Glsi11g2020 541 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 80 492 IPR001563 GO:0004185|GO:0006508
Glsi11g2020 541 Gene3D - 411 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2020 Glsi-ChrGlsi11 12766661 12773360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2020 369 508 Calmodulin-binding Proteins AT2G22960 31.206 4.61e-16 74.7