Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2019 ATGGCCATAGAGGAGTCTGAGCCTGTAATCCCAGAGCTAGAAAGGGAGGAAGTCTTAATTGCTGCAGCAAGACACATTGTGATGGCATTAGGATCAAATAAGAACCTTACCACTGATGCCAAGAAAATTCTGGCTGATCTTGGAACCAAATTGTCCTCCATGACCAACCCTGGTGAGAAGGAGGAGGAGGAGGAGGAGGGCGTTAAAGCAATTGAAGATCGGCTTGATACCGTTCAAGAGAAAATAATGAGATGGGAGGAAGATCAGTCTTTGATTTGGGATTTAGCACCCAAAGAAGCATCTGAATATCTGGCTGCAGCTGATGAAACCCGCCTATTGATTGAAAGGTTGGAGAGTTTGGATTTGAAGAGAGAGAACCAAGAGTATAAGATTTTGCAGAGGGCTCATGTTCTTCTTCAAGCAGCTATGGCTCGGCTGGAAGAAGAGTTCATGAACTTGCTTTTCCAGAACAAGCAACCTTTCGAGCCTGAATACGTATCTTTTCCATCCGTTGAAGAGGATGTGGTCGATGAGAACTTTATAGTCTCTTTAGATGATCATTCAGTTGAGGAATCACTCCAAAGAGAAAGTGTCAGCAAAGGCTCAGAGGAGCATATCATAGATCTGGTTCATCCAGAAGTGATCCCAGTTCTCAGGTGTATTGCAGACTTAATGTTTGCTTCAACGTATGACCGGGAATGTTCCCATGCCTATACCATTGTTCGAAAGGTTTCCTTAGAAGAGTGCCTCTTGTCTCTAGAAATGGAAAGGCTGAGCATTGAGGATGTCTTGAGAATGGAGTGGGGTGCTTTAAATTCCAAAATCAAAAGATGGATTTGGGCAGTGAAAATTTTTGTCAGGGTGTATCTAGCAAGTGAGAGGTGGCTCAGTGACCGGATTTTTGGGGAGGGGGAACCAGTTAGTCTAGTTTGCTTTGTTGATGCATCAAAGGCTTCAATGTTTCAGCTTCTGAATTTTAGTGAAGCCATGTCCATTGGCCCCCACCAACCTGAGAAATTGTTTCTCATTCTTGACATGTACGAGGCCTTAGCAGAACTTATGCCAGGCATAGATGCTTTGTACACAGATGAGGTTGGTTCTCCTGTTAGAATTGAATATCATGAAGTTTTAAACAGATTAGGAGATTGTGTGAGGATAACATTTCTTGAATTTGAAAACGCCATTGCGTCAAATGCATCATCAACCCCTTTAGTAGGTGGTGGAATCCATCCTTTGACCAGATACGTCATGAATTATATTAGCACTCTTACTGATTACAATGACACCCTTAATTTACTTCTGAGGAACCAAGAAGAAGAAGATGCCATTTTGCTGTCACCTGACAGAAGCTCAGATACAGAAGAAAAAGGCAAAAGCCAGGGCTCTCCGGATAGAGTTTCCTCAATGGCCCTTTACTTCCGATCGGTTGCTTTCATGCTCCAACGCAACCTTCTTGAGAAGTCCAAGTTATACAAGGAGGTTGCCTTGCAGCACTTGTTCTTAATGAACAATATACATTATATGGCTCAAAAGATTAAAGGGTCTGAACTTAGGCTCATATATGGGGATGAATGGATTCGAAAGCACAACTGGAAGTTTCAGCAGCATGCTATGAATTACGAGAGAGCTAGTTGGAGTTCCATTCTCTCCTTGCTTAAGGATGATGGAATTCACATTCCGGGTACGAATTCTATCTCAAAAAATCCTTTGAAGGAGAGCTTGCAGAGATTCTACCTTGGCTTTGAGGATGTTTACCGGAGCCAAACAGCTTGGCTTATCCCTGATGTTCAGCTTCGAGAAGACTTGCGCATCTCTATATCCCTCAAAGTGATTCAAGCTTATAGGACATTCATAGGGAGGCATAGTTATCACTTAACTGACAAAAACGTTAAGTACAATGCTGATGATTTAGAAAATTACCTTTTAGATTTCTTTGAGGGATCTCCAAAATCGTTGCAAAATCCTCACAGGAGGTAA 1977 0.4234 MAIEESEPVIPELEREEVLIAAARHIVMALGSNKNLTTDAKKILADLGTKLSSMTNPGEKEEEEEEGVKAIEDRLDTVQEKIMRWEEDQSLIWDLAPKEASEYLAAADETRLLIERLESLDLKRENQEYKILQRAHVLLQAAMARLEEEFMNLLFQNKQPFEPEYVSFPSVEEDVVDENFIVSLDDHSVEESLQRESVSKGSEEHIIDLVHPEVIPVLRCIADLMFASTYDRECSHAYTIVRKVSLEECLLSLEMERLSIEDVLRMEWGALNSKIKRWIWAVKIFVRVYLASERWLSDRIFGEGEPVSLVCFVDASKASMFQLLNFSEAMSIGPHQPEKLFLILDMYEALAELMPGIDALYTDEVGSPVRIEYHEVLNRLGDCVRITFLEFENAIASNASSTPLVGGGIHPLTRYVMNYISTLTDYNDTLNLLLRNQEEEDAILLSPDRSSDTEEKGKSQGSPDRVSSMALYFRSVAFMLQRNLLEKSKLYKEVALQHLFLMNNIHYMAQKIKGSELRLIYGDEWIRKHNWKFQQHAMNYERASWSSILSLLKDDGIHIPGTNSISKNPLKESLQRFYLGFEDVYRSQTAWLIPDVQLREDLRISISLKVIQAYRTFIGRHSYHLTDKNVKYNADDLENYLLDFFEGSPKSLQNPHRR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2019 658 Coils Coil 129 149 - -
Glsi11g2019 658 Gene3D Exocyst complex component Exo70 82 654 - -
Glsi11g2019 658 PANTHER EXOCYST COMPLEX PROTEIN EXO70 65 647 IPR004140 GO:0000145|GO:0006887
Glsi11g2019 658 MobiDBLite consensus disorder prediction 444 461 - -
Glsi11g2019 658 SUPERFAMILY Cullin repeat-like 87 646 IPR016159 -
Glsi11g2019 658 Coils Coil 61 88 - -
Glsi11g2019 658 Pfam Exo70 exocyst complex subunit 276 642 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi11g2019 658 MobiDBLite consensus disorder prediction 444 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2019 Glsi-ChrGlsi11 12764623 12766599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2019 12 658 EXO70 exocyst subunit family AT3G29400 48.489 0.0 570