Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2006 ATGAGGAGGTTTCCCTCCAACTCCGGCATATTGGGGGTTTGGTCCTCAAGATTAACGGTGATAACAGCAGCTGGGTACATCGATCGAACGGCTGCTGCTTACTCATTTATTATCGGCCGGTTTTGTAGGCTAAAGACCGTCATTCTGAGAAGTAGGGCAGCTACTCTTCTTGTTCTCTGTGATTCAGCTATGGCTACTGCGAGGAACGTCAAGGATGTTTCACCCCACGAATTTGTCAAGGCTTACTCGGCTCACCTCAAGCGTTCTGGCAAGATGGAGCTTCCTGAGTGGACCGATATTGTAAAAACAGCAAAATTTAAAGAGCTGGCTCCATATGATCCTGACTGGTATTATGTTAGAGCTGCCTCCATGGCAAGAAAGATCTACTTGAGAGGTGGTCTTGGTGTTGGCGCTTTTCAGAGGATCTATGGTGGAAGCCAGAGGAATGGAAGCCGTCCCCCGCATTTCTGCAAGAGCAGCGGAGCTATTGCCAGACACATTCTTCAACAATTGCAAAACATGGGCATTATTGAAATTGATCCAAAAGGAGGAAGAAGAATCACTTCTAGTGGTCAAAGGGATCTTGACCAAGTTGCTGGTCGAATTGTGGTTGCTCCTTGA 621 0.4718 MRRFPSNSGILGVWSSRLTVITAAGYIDRTAAAYSFIIGRFCRLKTVILRSRAATLLVLCDSAMATARNVKDVSPHEFVKAYSAHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLQNMGIIEIDPKGGRRITSSGQRDLDQVAGRIVVAP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2006 206 Gene3D - 51 205 IPR036388 -
Glsi11g2006 206 SMART Ribosomal_S19e_2 69 205 IPR001266 GO:0003735|GO:0005840|GO:0006412
Glsi11g2006 206 FunFam 40S ribosomal protein S19 65 206 - -
Glsi11g2006 206 PANTHER 40S RIBOSOMAL PROTEIN S19 64 202 IPR001266 GO:0003735|GO:0005840|GO:0006412
Glsi11g2006 206 ProSitePatterns Ribosomal protein S19e signature. 153 172 IPR018277 GO:0003735|GO:0005840|GO:0006412
Glsi11g2006 206 Pfam Ribosomal protein S19e 69 203 IPR001266 GO:0003735|GO:0005840|GO:0006412
Glsi11g2006 206 SUPERFAMILY "Winged helix" DNA-binding domain 69 204 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2006 Glsi-ChrGlsi11 12687079 12690020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2006 64 206 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 83.916 1.59e-91 263