Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1987 ATGTTCAATCTCTTCTCTCTCCCTAGGTTTTTGGGAAAGCTTTCTCAAAGTAGTAGCGTCGGGGACAGTAACTGCGACATCCCCGACGACAATCAAACTTCCAACTCCGTCGAGTGTTACGCCTGCACTCAGGTAGGCGTCCCCGTCTTCCACTCCACCAGCTGCGACAGCTATCACCCACCCCAATGGGAGGCTTCTGCTGGTTCTTCCTTAATCCCCATCCAGAACAAGACCGGCGGGAAGAATCCGAGTCGGCCGGCGGGGCGACCCAAATCGGTGGTGGACCCTCGGAGCAAGCGCGTGCAGAGGTGGAACAGAGCGTTGCTGCTGGCCCGTGGGATGGCGCTGGCGATAGACCCGCTGTTTTTCTACGCGCTGTCGATAGGGAGGGACGGAGCACCGTGCCTGTACATGGACGGGGGGTTGGCAGCGATTGTGACGGTGCTGAGGACGTGCGTGGACGCGGTGCACGTGTTCCATGTGTGGCTGCAGTTCAGGATGGCGTACGTATCGAGGGAGTCGATGGTAGTTGGGTGCGGGAAGCTGGTGTGGGACCCACGTGCCGTAGCATGGCACTACCTGAGGTCGATGAGAGGTTTCTGGTTCGACGCCTTCGTGATACTCCCCGTTCCCCAGGCCGTGTTTTGGTTAATACTCCCTAAATTGATAAGAGAAGAGCGAATTAAAATCATAATGACCATAATGCTACTGATTTTCTTGTTCCAATTTCTCCCTAAAGTATACCACAGCATCTGCATGATGAGGAGAATGCAAAAAGTAACAGGTTATATCTTTGGCACCATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTACTTCATCGCTTCCCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGTGTTGCGTCGTGCCTCCGGCAGCAGTGTGAAAGAGGGCATGGATGTAATCTCCCTCTGTCATGCTCAGAGGAGGTATGCTACAAGTTTCTGGTACCAGCAGACTCGGTAGGGAATTCATGTGGTGGAAACTCGACAGTAGTGGTAAGAAAGCCACTGTGCTTGGATGTTCAAGGACCTTTCCAATATGGGATCTACCAATGGGCTCTTCCAGTCATATCCAGCAACTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAACGATCTTGAGCCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATCGTACTTAGTGGACTACTGCTCTTCACTTTGTTGATTGGGAACATCCAGGTATTCTTACACGCAGTCATGGCAAAGAAAAGAAAAATGCAGTTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGCTACCGTCCCGTTTAAGACAAAGAGTTCGCCAGTTTGAACGTCAGAGATGGGTAGCCATGGGAGGAGAAGATGAAATGGAATTGATTAGAGACTTGCCTGAAGGATTGAGGAGGGACATCAAGCGCTATCTTTGCCTAGACCTCATAAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTCAGACCCCTAGTCTTCTCCAAAGATGAAAAGATAATTAGAGAAGGGGACCCAGTACCAAGGATGGTGTTCCTAGTTCGTGGACGCATAAAACGCAACCAAAGCCTAAGCAAAGGCATGGTAGCCACCAGTATACTTGAACCGGGAGGGTTTTTGGGTGATGAGCTGCTCTCCTGGTGCCTTCGCCGCCCATTTGTAGACCGGCTTCCGGCTTCCTCAGCCACATTTATGTGTGTTGAAGCAACAGAAGCCTTTGGCCTGGATGCAGATCACCTTAGGTACATCACCGATCACTTCCGCTACAAATTTGCAAATGAGAGGCTAAAGAGAACGGCAAGATATTACTCTTCCAATTGGCGAACTTGGGCTGCTGTTAATATACAATTTGCTTGGCGACGTTACAGGAAGAGGACCGGTGGTCCAGTGACCCCTGTAATGGAAGATGGAGGCACTGAACGAAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATAAGGCCACATGATCACCTTGAATAA 2091 0.5007 MFNLFSLPRFLGKLSQSSSVGDSNCDIPDDNQTSNSVECYACTQVGVPVFHSTSCDSYHPPQWEASAGSSLIPIQNKTGGKNPSRPAGRPKSVVDPRSKRVQRWNRALLLARGMALAIDPLFFYALSIGRDGAPCLYMDGGLAAIVTVLRTCVDAVHVFHVWLQFRMAYVSRESMVVGCGKLVWDPRAVAWHYLRSMRGFWFDAFVILPVPQAVFWLILPKLIREERIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERGHGCNLPLSCSEEVCYKFLVPADSVGNSCGGNSTVVVRKPLCLDVQGPFQYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRQFERQRWVAMGGEDEMELIRDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVRPLVFSKDEKIIREGDPVPRMVFLVRGRIKRNQSLSKGMVATSILEPGGFLGDELLSWCLRRPFVDRLPASSATFMCVEATEAFGLDADHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRTGGPVTPVMEDGGTERRLLQYAAMFMSIRPHDHLE 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1987 696 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 85 661 - -
Glsi11g1987 696 SMART cnmp_10 509 635 IPR000595 -
Glsi11g1987 696 Gene3D - 135 432 - -
Glsi11g1987 696 ProSiteProfiles cAMP/cGMP binding motif profile. 509 619 IPR000595 -
Glsi11g1987 696 MobiDBLite consensus disorder prediction 74 96 - -
Glsi11g1987 696 Pfam Ion transport protein 105 427 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Glsi11g1987 696 SUPERFAMILY cAMP-binding domain-like 436 623 IPR018490 -
Glsi11g1987 696 Gene3D Jelly Rolls 507 625 IPR014710 -
Glsi11g1987 696 SUPERFAMILY Voltage-gated potassium channels 95 430 - -
Glsi11g1987 696 CDD CAP_ED 509 619 IPR000595 -
Glsi11g1987 696 Gene3D Helix hairpin bin 435 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1987 Glsi-ChrGlsi11 12569572 12573233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1987 35 696 Ion Channels AT5G15410 78.877 0.0 1050