Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1983 ATGGAGGGGCTCAAGAAGGCGTTTGGGTCAAGGTCACCAGCCATGGTGCTGCTGCTTCTACTGTGCATGGTGCTTGTCATGCTGCCGGCGGCCTCGGCTACGCGGTGGACGGTCGGAGGAAACATGGGTTGGACTAATAATGTTAACTACACTATATGGGCTCAGGGCAAGCACTTCTACAATGGGGATTGGCTCTTTTTTGTGTATGATAGGAACCAGATGAGCGTGCTAGAGGTGAACAAGACGGACTATGAGAATTGCAACGCTGATCATCCACTTCACAACTACACAACTGGGGCTGGAAGAGATGTGGTTGCACTGAACGTGACTCGCCATTATTATTTCATAAGCGGGAAGGGGTTCTGCTATGGTGGCATGAAGGTTGCTATCCGCGTTGAAAACCCACCCCCTCCACCCGTAGCTTCCCCTATAAAAGCTGGGGCACCATCTATCTTCTCCCCAACCCACATTCTTCTCTTGCCCATTGCTTTTGCCATTGGAGCAGCATGGGATGCTTTCATTCATCTCTCGTGA 534 0.5112 MEGLKKAFGSRSPAMVLLLLLCMVLVMLPAASATRWTVGGNMGWTNNVNYTIWAQGKHFYNGDWLFFVYDRNQMSVLEVNKTDYENCNADHPLHNYTTGAGRDVVALNVTRHYYFISGKGFCYGGMKVAIRVENPPPPPVASPIKAGAPSIFSPTHILLLPIAFAIGAAWDAFIHLS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1983 177 FunFam Lamin-like protein 32 135 - -
Glsi11g1983 177 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Glsi11g1983 177 PANTHER BLUE COPPER PROTEIN 33 133 IPR039391 GO:0009055
Glsi11g1983 177 SUPERFAMILY Cupredoxins 33 132 IPR008972 -
Glsi11g1983 177 Gene3D - 32 135 IPR008972 -
Glsi11g1983 177 Pfam Plastocyanin-like domain 44 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1983 Glsi-ChrGlsi11 12552771 12554263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1983 16 176 Phytocyanin Superfamily AT5G15350 51.807 1.72e-61 186