Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1965 ATGGCCTCAAGAAATTATGCCACCACAACTGGGACAAAGGAACAGAAAGTTAAGGTGCCTCTTGTTTTGTTTGGGGGTTCAGGAAACTATGCCTCTGCTTTGTACATTGCAGTAGTAAAAGCTAATGTTTTGGAAAAGGTTGAGTCTGAGGTTCTTGACCTTGTTGAGGCAACAAAGAGAAGTCCCAAATTTTCTGGGTTTACTAAGGACGTGTCTGTGCCCAAAGATACTAGAGTAAAGGTTATCCAGGCTATTTGTGGTGAAGCTAAATTTACAGATATTACAAAGAACTTTCTTGCATGTGTAGTTTAG 312 0.4006 MASRNYATTTGTKEQKVKVPLVLFGGSGNYASALYIAVVKANVLEKVESEVLDLVEATKRSPKFSGFTKDVSVPKDTRVKVIQAICGEAKFTDITKNFLACVV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1965 103 Pfam ATP synthase delta (OSCP) subunit 28 102 IPR000711 GO:0015986|GO:0046933
Glsi11g1965 103 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 27 101 IPR026015 -
Glsi11g1965 103 Gene3D - 26 103 IPR026015 -
Glsi11g1965 103 PANTHER ATP SYNTHASE DELTA CHAIN 2 101 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1965 Glsi-ChrGlsi11 12417567 12418586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1965 67 102 Primary Pumps ATPases AT5G13450 52.778 3.61e-07 44.3