Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1950 ATGGAAGCTTCTGACAACACTGATGGATTATCCTTGAACCTACCTTTGCTGCTTGACGAAAAGCAACACCAACTAAATGCTGAAAGACGAACCCAAACTGCTGGCGATCAACCGAGCACCGGCGACACATCCTCTGCCAAGACCTGTATTAATGGCCTCAATGCGTTATCAGGAGTTGGGATACTCTCCGTTCCATATGCTCTAGCATCTGGAGGATGGCTAAGCTTAGTTCTTCTGTTCGTTATCTCCATGGCAACCTTGTACTCAGGCCTGTTGATTAAAAAATGTATGGATAAGAATTCGGATATCAGAACCTATCCTGACATAGGTGAACATGCATTTGGAAGGAAAGGTAGACTAGTGGTATCAGTGACCATGTACACTGAGCTCTACTTAGTTGCTACAGGGTTTTTAATTCTAGAAGGGGATAACTTAAATAATCTATTCCCCAATATGGGGATTGAGTTAGCCGGTTTAGCAGTTGGTGGAAAGCAATTCTTTGTGATATTGATCAGCCTTGTTATAATGCCTTCAGTTTGGTTAGACGACTTAAGCCTACTTTCTTATATCTCCGCAAGTGGCGTGTTTGCCTCTGCTATCATCCTTTGCTCAATATTCTGGACTGTGGCAGCTGATGGAGTTGGATTTCAGCAAAATGGAACTATGCTTAATTGGAATGGGATCCCTACAGCTGTCAGCTTGTATGCGTTCTGTTATTGTGCACATCCAGTCTTCCCCACCCTCTATAATTCTATCAGAAAAAAACACCAGTTTTCTAATGTTCTACTGATATGCTTCGTGTTAAGCACTTTGGGTTATGCATCAATGGCTATATTTGGTTACCTGATGTTTGGTCCAGAAGTTCAATCACAGATAACGTTAGACCTACCAACAAACAAATTAAGTTCAAAAGTAGCCATATATACTACCTTGGTGAATCCAATATCCAAGTACGCTTTGATGGTTACACCCATCACAAATGCTTTAAAAGACTTGCTTCCTGAACCCTACAAGAACAGGCTTAGCAGTATCTTGATCAGCACTATCTTGGTAATCAGCACTGCGATGGTTGCCCTGGCTATTCCTTTCTTTGGGGATCTCATGTCACTGGTTGGAGCATTTTTAAGTGTCACAGCTTCAATTCTACTGCCATGCTTGTGCTACTTGAAAATTTCGGGCACGTATCGAAGATTTGGAGTTGAAATGGTAGCCACAGTGGCAATAATATTGATGGGGGTAGCAATTGGAGTGTTTGGTACTTACACCTCACTCCTACAAATTATCGAGCACTGGTACTCATAA 1302 0.4201 MEASDNTDGLSLNLPLLLDEKQHQLNAERRTQTAGDQPSTGDTSSAKTCINGLNALSGVGILSVPYALASGGWLSLVLLFVISMATLYSGLLIKKCMDKNSDIRTYPDIGEHAFGRKGRLVVSVTMYTELYLVATGFLILEGDNLNNLFPNMGIELAGLAVGGKQFFVILISLVIMPSVWLDDLSLLSYISASGVFASAIILCSIFWTVAADGVGFQQNGTMLNWNGIPTAVSLYAFCYCAHPVFPTLYNSIRKKHQFSNVLLICFVLSTLGYASMAIFGYLMFGPEVQSQITLDLPTNKLSSKVAIYTTLVNPISKYALMVTPITNALKDLLPEPYKNRLSSILISTILVISTAMVALAIPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYRRFGVEMVATVAIILMGVAIGVFGTYTSLLQIIEHWYS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1950 433 MobiDBLite consensus disorder prediction 26 45 - -
Glsi11g1950 433 MobiDBLite consensus disorder prediction 28 45 - -
Glsi11g1950 433 PANTHER OS05G0424000 PROTEIN-RELATED 43 411 - -
Glsi11g1950 433 Pfam Transmembrane amino acid transporter protein 43 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1950 Glsi-ChrGlsi11 12282055 12285123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1950 36 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.898 2.09e-170 482