Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1938 ATGGGTTTTCGGACAGGGTTTTTGCACCGTAAGATGGTTCTTTTTTCTGGTTATTTTGGGGTCTTCCTTTCCTACCTTACGCAGGCTCTGTTCTGGGTATTCGCCAGAATCTTCATGAGATATTTGAGTCCTGAAGCTATCAATTCTGCTCGTTCTTCGGCTCTTTCCTACGGAGACTATCAAACCGACTCAAAATTTTCTGAGCCAAAATCAGAGTCTGAAGTAGGTTATTCTGAATTTTCTAAAGATAAAGAGTTGCGGTTGGAAAGCTTTGAGGAAGGTGCTAGTACTCTTACACATGAAAGTAATCTGGTCGATTCTAATGATTCCCAGCCTGAGACACATCCCAAAATAGACTGTTCTGAAATCGTTAACGACATTGATAATGTTGAGCTTGAGGAAGAGGAGCCTCCAAAGTTGGTTTTTAAGTTTCAATATCAGACTTGGAAATGCAGTGAAGAATCCAACGAAAGCTATAATAGAAGTTCTGATGTTGTTAACACAGATACGGCCTCTGCGAGCACCAGCAAATATGAGTTCATCTCAGGCAAGTGTTTTAGCCACATCTTAGAGGAACCTGAAGTTTCGATTCTTAGTGTCAAAGAATTATTTGTTCATTCAAATGATGGGTCATTGGAAAATAAGGCAATCAACTATTCTGGGTTCTCATCTGAGAGAGAAAAATGTAAAGGAGGAGGTGTTCATCCAGAAGTTGCAGACAATTCCATAGAAAGGGTAGACGAAGAGAAGGCGGCCGAGAAGGTCAAGGCTGTGCCATCTCTAGAAGCAAGAGAACAACCTGGCTCTGGGAAAGATCAAATAGAGAATCCCGACAAAAATATGCTGGCTAAAGAAATTTCAGCTGCGGATAATTTTCTTTCTGAGGATGATATCATTGGTTTAGGCACAGAATCAATTTCTACCGGTTCAAATATTAATTCTTTGTTCGAGAGTCAATTAAATGGTTTGACGGGCGATAATTTTTGGTCAGACGCAGACTTGGGAACGACTAGTGAGCTGGACGCGTCGAGAAACCATGATGATGAAAATGCAGGGTTAACAGAAGATGATACGGACTTAGACGAGGATAAGATGTCAGAAAATTTAGATGTTGGCTATGAGCCTGACGATTTTGATGAAGAAGAGAGAGATATAATGGAAGAGCTTGGAAAACTAGAAGAGTCTCAGCTACATAATTCAGATACGGCGGAGAATGCGAAGCTGTCAGGTATTAGCTTTCATGGCAACGTCAATTCCAAAACAGAAGAATTTGGTAACAAAGAAAAAGAGGCAATTGACTGTTCAGACGAATCTGCAAAACCCAATTTGCAGATTTCAACAACTTCTGATCTTGATGACTCCAACCGGTTTGATACTCTATGGGAACATCAAGATTTAATAGAGCAGCTGAAGATGGAGCTGAAGAAGGTCAGAGCCACCGGTCTGCCTACCATTCTTGAGGATTCTGAGTCTCCAAGGATAGTGGAAGACTTGAAGCCATGGAAAATAGACGAAAAATTCCAGCATAGTAGTACCATAAACGACCTTCCAAAATTCTACAGGAGTTACAGAGAACGAATGCGAAAATTCGATATCTTAAATTACCAAAAGATGTATGCTAAAGGTGTTTTGCAGTCAAAGGACCCACTGCAATCGTTTTCAAGCCACAGGGCATCTGGTCCAGCAATCACATCCCTTCTTTCTCACAGCTTTGGCCTCCATAGGCGTAAAAAATCTGATTTCGATCCCACTAAGAAGTTCATTAGAGAATTGTACAGTGATCTGGAAATGGTTTATGTGGGACAACTGTGCCTTTCTTGGGAATTCCTTCAGTGGGAATATGAGAAGGCCTTGGAGCTATGGGAATCTGATCAGTATGGAATAAGAAGGTACAACGAAGTTGCGGGGGAGTTTCAACAATTCCAAGTGCTACTGCAGAGATTTATAGAGAACGAACCTTTCCAGGGTCCACGGGTAGAAAACTACGTCAGGAATCGTTGCCTTATGCGAAATCTTCTTCAAGTTCCAGTAATAAGAGAGGACAATGCAAAGGACAAAAAGAAACATAGAAAAAGAGATGCAGATGACGATGGCATCACAAGTGATATGCTAGTAGAAATATTGGAAGAATCAATAAGAACAATTTGGCGTTTCATTAGAGCCGATAAAGATGCATCTAACTTGACACACAAAGGTCTAAGAGAGAATAAAGTAGAGGTCCATGACCCTGGAGATTCAGAGCTTTTGGTGGAGGTTCGAGCAGAGCTTCAAAAGAAGGAAAAGAGACTGAGAGAGACCCCTTTTTTCTATGTTCTGTGGCCGTTTTCGCTCGAACACGAAGACGAAGACAGAGGCGATCATTATCCCTGCTGGAAGATGGTGCAGCGGCTCACGTACCGCAAGCGTCACAGCTATGCTACTAAATCCAACCAGCACAGGGTTGTGAAAACCCCTGGTGGGAAGTTGGTGTATCAAACCACAAAGAAGAGAGCAAGTGGACCAAAGTGTCCTGTTACTGGGAAGAGGATCCAAGGGATTCCACACTTGAGACCTGTTGAATACAAGAGATCTAGATTGCCTAGGAACCGTCGGACAGTTAATCGGGCCTATGGAGGTGTATTGTCTGGAGGAGCAGTTAGAGAAAGGATAATCCGTGCTTTCCTGGTTGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAGATCCAGAAGGCAAAAGAGAAGCAAGCAGCAAAGAGTTAA 2739 0.4217 MGFRTGFLHRKMVLFSGYFGVFLSYLTQALFWVFARIFMRYLSPEAINSARSSALSYGDYQTDSKFSEPKSESEVGYSEFSKDKELRLESFEEGASTLTHESNLVDSNDSQPETHPKIDCSEIVNDIDNVELEEEEPPKLVFKFQYQTWKCSEESNESYNRSSDVVNTDTASASTSKYEFISGKCFSHILEEPEVSILSVKELFVHSNDGSLENKAINYSGFSSEREKCKGGGVHPEVADNSIERVDEEKAAEKVKAVPSLEAREQPGSGKDQIENPDKNMLAKEISAADNFLSEDDIIGLGTESISTGSNINSLFESQLNGLTGDNFWSDADLGTTSELDASRNHDDENAGLTEDDTDLDEDKMSENLDVGYEPDDFDEEERDIMEELGKLEESQLHNSDTAENAKLSGISFHGNVNSKTEEFGNKEKEAIDCSDESAKPNLQISTTSDLDDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIVEDLKPWKIDEKFQHSSTINDLPKFYRSYRERMRKFDILNYQKMYAKGVLQSKDPLQSFSSHRASGPAITSLLSHSFGLHRRKKSDFDPTKKFIRELYSDLEMVYVGQLCLSWEFLQWEYEKALELWESDQYGIRRYNEVAGEFQQFQVLLQRFIENEPFQGPRVENYVRNRCLMRNLLQVPVIREDNAKDKKKHRKRDADDDGITSDMLVEILEESIRTIWRFIRADKDASNLTHKGLRENKVEVHDPGDSELLVEVRAELQKKEKRLRETPFFYVLWPFSLEHEDEDRGDHYPCWKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPVEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQAAKS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1938 912 Pfam Protein of unknown function (DUF1666) 593 766 IPR012870 -
Glsi11g1938 912 Gene3D - 831 912 - -
Glsi11g1938 912 PRINTS Ribosomal protein L34 signature 818 835 IPR008195 GO:0003735|GO:0005840|GO:0006412
Glsi11g1938 912 PRINTS Ribosomal protein L34 signature 858 880 IPR008195 GO:0003735|GO:0005840|GO:0006412
Glsi11g1938 912 PRINTS Ribosomal protein L34 signature 805 818 IPR008195 GO:0003735|GO:0005840|GO:0006412
Glsi11g1938 912 PRINTS Ribosomal protein L34 signature 836 846 IPR008195 GO:0003735|GO:0005840|GO:0006412
Glsi11g1938 912 Gene3D - 793 829 - -
Glsi11g1938 912 ProSitePatterns Ribosomal protein L34e signature. 807 820 IPR018065 -
Glsi11g1938 912 MobiDBLite consensus disorder prediction 339 360 - -
Glsi11g1938 912 Coils Coil 460 480 - -
Glsi11g1938 912 PANTHER OS09G0413600 PROTEIN 6 765 - -
Glsi11g1938 912 Pfam Ribosomal protein L34e 793 888 IPR008195 GO:0003735|GO:0005840|GO:0006412
Glsi11g1938 912 Coils Coil 907 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1938 Glsi-ChrGlsi11 12203666 12210159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1938 793 911 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 91.597 1.25e-67 219