Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1922 ATGGAGGCCATGTCAAAAATCTCTGCTCCTTGTGGTCTAGAGACTGAAGAAGATTGCTGCGTTGAAGAGAATGATGAACTCAAATCTGCTAAAGATGAGATGGGTGAGGTGAAAGAAGAAAATGAAAGATTGAAGATGATGCTGGAGAGAGTTGAAAAGGATTACCAATCTCTCCAACTGCGTTTCTTTGACATTCTTCGAAAAGAAGCTTCTAAAAAAGGTGTAGCAGATTCAGCAACCTCCCATGATGAAACCGAAGAACCAGAGCTCGTGTCACTTTGTCTTGGGAGAAGTCCAAGGGAGCCTAAAAAGGATGGAAGAATTGGAAACTCAAGCAAACCTAAAGAAAGTGAAGATCTAGAAGCCTGCCTTACGCTTGGATTAGACTCCAAATGTCAGTCATCAATGGAGGTGGTGTCTGATCTGAACCCAGTGAACAGCTCAGGAGAACCTAAGGAAGCAAAGGCGGGGGAAACATGGCCAACAAACAAATCAGTCAGGGCAAAAAATGGAGACGATGAAATTCCAGAGCAAATGCCTTCCAAGAGAGCTAGGGTTTCTGTGAGAGCTCGATGTGACACTCCCACGATGAACGATGGATGCCAGTGGAGGAAATATGGACAGAAGATAGCGAAAGGAAATCCATGTCCACGAGCATACTATCGTTGCACAGTTGCACCATCATGCCCAGTCAGGAGACAGGTACAAAGATGTGCTGAGGACATGTCCATCTTGATCACTACATATGAAGGTACCCACAACCACCCACTTCCAGTTTCGGCGACAGCCATGGCTTCCACCACTTCCGCCGCTGCTTCCATGCTATTGTCAGGTTCGTCAACATCTCAGCCTGCAGGTCATAGTTCAGCATCATTTGGAAATGCCCCTACACTTCTTAATGGTCTGAATTTCGGCCACTTTGATCAATCGAGGGCAAAACAAATCTTCTTGCCCAACCCTGCCTCACCTTTGTTCCCAACAATCACTCTCGACCTTACTTCTGCTTCATCCTCCTCATCCACACAAATCAATCGTTTCCCTTCAAACTTTGCTTTAAGCCCACGATTGCCTTCAGCAAGTCTAAGCTTTTGTTCACCGGAGCCCAACATTTCACCGACAGTTTGGGGCAATGGAATCCTTAATAATGTTAATATGCCCATTGACAAAACCTACACGAGGCCAATTAACCTGGGAAATCAATTGCAACAACATTTCTATCAAAACTGCATGAAGAAGGAGGCTCCTTCACAAGAGGCTTTAGCAGAAACCCTGACCAAAGCCATCAGTACAGACCCAAGTTTTCACTCAGTAATAGCTGCTGCAGTTTCATCTATAGTGGGACAAGGATCGACCAATGTGAACCAGGGCGGAGGAGAGATGTCAAGTTTAGGCCTGAACTTGAAAGTGGGAGAGCGTTCTCAATTTACTTCTTCCAATTCGTTGACCCAGAACGGTAAAGGGTGCTTAACAGGCCACTTCAACTGGTTGTCATCAAGTTCTCATACTGGAAACTTGATGCTTCTCCAACCTCCATTGCCATTTTCTATCTCTAAGAGTAGCGTGTCTCCTTCAATTATTGATCAAATCAATCATTAA 1596 0.4499 MEAMSKISAPCGLETEEDCCVEENDELKSAKDEMGEVKEENERLKMMLERVEKDYQSLQLRFFDILRKEASKKGVADSATSHDETEEPELVSLCLGRSPREPKKDGRIGNSSKPKESEDLEACLTLGLDSKCQSSMEVVSDLNPVNSSGEPKEAKAGETWPTNKSVRAKNGDDEIPEQMPSKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRRQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPAGHSSASFGNAPTLLNGLNFGHFDQSRAKQIFLPNPASPLFPTITLDLTSASSSSSTQINRFPSNFALSPRLPSASLSFCSPEPNISPTVWGNGILNNVNMPIDKTYTRPINLGNQLQQHFYQNCMKKEAPSQEALAETLTKAISTDPSFHSVIAAAVSSIVGQGSTNVNQGGGEMSSLGLNLKVGERSQFTSSNSLTQNGKGCLTGHFNWLSSSSHTGNLMLLQPPLPFSISKSSVSPSIIDQINH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1922 531 MobiDBLite consensus disorder prediction 167 184 - -
Glsi11g1922 531 ProSiteProfiles WRKY domain profile. 192 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g1922 531 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 454 IPR044810 GO:0003700
Glsi11g1922 531 MobiDBLite consensus disorder prediction 73 118 - -
Glsi11g1922 531 SUPERFAMILY WRKY DNA-binding domain 190 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g1922 531 Coils Coil 13 61 - -
Glsi11g1922 531 Pfam WRKY DNA -binding domain 198 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g1922 531 Gene3D WRKY domain 182 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g1922 531 FunFam probable WRKY transcription factor 31 182 259 - -
Glsi11g1922 531 SMART WRKY_cls 197 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g1922 531 MobiDBLite consensus disorder prediction 140 184 - -
Glsi11g1922 531 MobiDBLite consensus disorder prediction 98 118 - -
Glsi11g1922 531 MobiDBLite consensus disorder prediction 73 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1922 Glsi-ChrGlsi11 12082507 12085311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1922 34 496 WRKY Transcription Factor Family AT5G15130 44.378 1.45e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g1922 WRKY 1.2e-23 CL0274