Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1920 ATGGCCTGCTTAACCACCTCGGTTGGAGATGGCCTAAGACTATTTAACGTAAAGAATTGTGTTGACTACTTTGCGCACCATGCCTTTGAGGATCCTAGTGGACTATCTACCTTTTTAAAACACTTGTTCTCTTCCGTAATTCAATTTAGATTAGATCCGCATCCTGCACATTCTGCGATCGTCTTCGACAATATGTACGGCTTTGAAGCTCTTACGTTTAACATCCATGGCGGTTACCTGGAGGCGATCGTGCGTGGGCACCGAGCTGGGTTGCTCACAGCAGCCGATTACAACAATTTGTGCCAATGTGAAACCCTGGACGATATCAAGATGCACCTTTCTGCCACTGAGTATGGCCCTTACCTGCAAAATGAACCTTCTCCATTGCATACAACTACGATTGTGGAGAAATGTACTCTTAAGCTGGTTGATGATTATAAGCACATGTTATGCCAAGCTACGGAGCCCTTGTCAACCTTTTTAGAGTATATCACATATGGCCACATGATAGATAATGTTGTTCTGATTGTCACTGGCACCTTGCACGAGAGAGATGTTCAAGAACTATTAGAAAAATGCCATCCACTGGGCATGTTTGACAGTATTGCCACTCTGGCAGTTGCTCAGAATATGCGGGAGCTCTACAGGCTGGTACTTGTTGACACTCCTCTGGCGCCATACTTCTCTGAGTGCATTACATCAGAGGACTTAGATGATATGAACATTGAAATAATGAGGAACACTCTTTACAAGGCATACCTTGAAGACTTTTACAGATTTTGTCAGAAACTTGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGCATTGGTACTGAGCTCACCAGAGATGATCGCAGAAAATTGTACTCTAATTTTGGTTTACTTTACCCTTATGGCCATGAGGAATTGGCCATCTGTGAGGACATTGATCAGGTTCGCGCTGTTATGGAAAAATATCCTCCATATCAGTCTATTTTTGCTAAATTATCATACGGGGAGAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAGAGGCTTTGCTTAGCGTTTGAGCAACAGTTCCATTACGCTGTGTTCTTTGCATATATGAGGTTAAGGGAGCAGGAGATTAGGAACCTAATGTGGATTTCAGAATGTGTGGCTCAGAATCAAAAGTCTAGAGTTCATGACAGTGTTGTCTTCATATTTTAG 1248 0.4311 MACLTTSVGDGLRLFNVKNCVDYFAHHAFEDPSGLSTFLKHLFSSVIQFRLDPHPAHSAIVFDNMYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1920 415 FunFam V-type proton ATPase subunit 78 192 - -
Glsi11g1920 415 Gene3D ATP synthase (C/AC39) subunit, domain 3 78 399 IPR044911 -
Glsi11g1920 415 SUPERFAMILY V-type ATP synthase subunit C 78 413 IPR036079 -
Glsi11g1920 415 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 65 415 IPR016727 GO:0033179|GO:0046961|GO:1902600
Glsi11g1920 415 Gene3D - 270 373 IPR035067 -
Glsi11g1920 415 FunFam V-type proton ATPase subunit 270 373 - -
Glsi11g1920 415 FunFam V-type proton ATPase subunit 155 269 - -
Glsi11g1920 415 Pfam ATP synthase (C/AC39) subunit 80 408 IPR002843 GO:0046961
Glsi11g1920 415 Gene3D - 155 263 IPR035067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1920 Glsi-ChrGlsi11 12059597 12064431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1920 65 415 Primary Pumps ATPases(2) AT3G28710 94.587 0.0 706