LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g1920	ATGGCCTGCTTAACCACCTCGGTTGGAGATGGCCTAAGACTATTTAACGTAAAGAATTGTGTTGACTACTTTGCGCACCATGCCTTTGAGGATCCTAGTGGACTATCTACCTTTTTAAAACACTTGTTCTCTTCCGTAATTCAATTTAGATTAGATCCGCATCCTGCACATTCTGCGATCGTCTTCGACAATATGTACGGCTTTGAAGCTCTTACGTTTAACATCCATGGCGGTTACCTGGAGGCGATCGTGCGTGGGCACCGAGCTGGGTTGCTCACAGCAGCCGATTACAACAATTTGTGCCAATGTGAAACCCTGGACGATATCAAGATGCACCTTTCTGCCACTGAGTATGGCCCTTACCTGCAAAATGAACCTTCTCCATTGCATACAACTACGATTGTGGAGAAATGTACTCTTAAGCTGGTTGATGATTATAAGCACATGTTATGCCAAGCTACGGAGCCCTTGTCAACCTTTTTAGAGTATATCACATATGGCCACATGATAGATAATGTTGTTCTGATTGTCACTGGCACCTTGCACGAGAGAGATGTTCAAGAACTATTAGAAAAATGCCATCCACTGGGCATGTTTGACAGTATTGCCACTCTGGCAGTTGCTCAGAATATGCGGGAGCTCTACAGGCTGGTACTTGTTGACACTCCTCTGGCGCCATACTTCTCTGAGTGCATTACATCAGAGGACTTAGATGATATGAACATTGAAATAATGAGGAACACTCTTTACAAGGCATACCTTGAAGACTTTTACAGATTTTGTCAGAAACTTGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGCATTGGTACTGAGCTCACCAGAGATGATCGCAGAAAATTGTACTCTAATTTTGGTTTACTTTACCCTTATGGCCATGAGGAATTGGCCATCTGTGAGGACATTGATCAGGTTCGCGCTGTTATGGAAAAATATCCTCCATATCAGTCTATTTTTGCTAAATTATCATACGGGGAGAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAGAGGCTTTGCTTAGCGTTTGAGCAACAGTTCCATTACGCTGTGTTCTTTGCATATATGAGGTTAAGGGAGCAGGAGATTAGGAACCTAATGTGGATTTCAGAATGTGTGGCTCAGAATCAAAAGTCTAGAGTTCATGACAGTGTTGTCTTCATATTTTAG	1248	0.4311	MACLTTSVGDGLRLFNVKNCVDYFAHHAFEDPSGLSTFLKHLFSSVIQFRLDPHPAHSAIVFDNMYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF	415

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g1920	415	FunFam	V-type proton ATPase subunit	78	192	-	-
	Glsi11g1920	415	Gene3D	ATP synthase (C/AC39) subunit, domain 3	78	399	IPR044911	-
	Glsi11g1920	415	SUPERFAMILY	V-type ATP synthase subunit C	78	413	IPR036079	-
	Glsi11g1920	415	PANTHER	VACUOLAR ATP SYNTHASE SUBUNIT AC39	65	415	IPR016727	GO:0033179\|GO:0046961\|GO:1902600
	Glsi11g1920	415	Gene3D	-	270	373	IPR035067	-
	Glsi11g1920	415	FunFam	V-type proton ATPase subunit	270	373	-	-
	Glsi11g1920	415	FunFam	V-type proton ATPase subunit	155	269	-	-
	Glsi11g1920	415	Pfam	ATP synthase (C/AC39) subunit	80	408	IPR002843	GO:0046961
	Glsi11g1920	415	Gene3D	-	155	263	IPR035067	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g1920	Glsi-ChrGlsi11	12059597	12064431	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g1920	65	415	Primary Pumps ATPases(2)	AT3G28710	94.587	0.0	706

Showing 1 to 1 of 1 entries