Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1907 ATGACAATTAAAGGAGGCACAAACAAGGCATGTGCTGCTTGCAAGTACCAAAGAAGAAGATGTTCAAAGGAGTGCCCTCTAGCTCCATATTTCCCTGCCGATCAACCCAAAAAGTTCAGCAACGCTCATCGCTTGTTTGGCGTGTCTAACATAATGAGAATACTCAACCAGGTAGAACCAAAGCTCAGAGATGAAGCCATGAAATCCATTATTTTTGAGTCGGACATGCGGGCTCAGTATCCAGTTAAGGGCTGTTTGGGCATTATATGTATCTACCAAAATCAGATTTTACAAGCCATGAAAGATCTAAGTTGTGTTAAAATGCGTATTGCCGTTTATAAGGAATTTCATTATCAACACACGAATATTCCTGATCCCATCTCTCTATCTCCGCCCGATTGCTATGGAACGTCTCAATTACATTTCGGAGATACCTATCCAATCTACAACCATTTCCAACATACTAATGCTAATGAAATTGAGGTGTTTGATGGCGATGGAGTTTATGGTAATACTTGCATTGAAAATGACGATATGAAACCATGGATTCATCACCAACCTTATGGTAATGGCATGATCAACAACGTCAATATTGCTATGGCCAATCACCAAGAGTTGGATATTCTTCCCGACTATGATTACATACCCTATGATGCAATTGCTGATGATACACAGTCATTTATTGAAGGCAAAGACGCATGCGAATCAAGTGCGGAGTCATCCTCAAAACAACATATTCAACATGTTTCCAAAAATGAATTGAAAAATGCAACAACAGCATGCTTCACTCTCACTAGCTAG 801 0.3983 MTIKGGTNKACAACKYQRRRCSKECPLAPYFPADQPKKFSNAHRLFGVSNIMRILNQVEPKLRDEAMKSIIFESDMRAQYPVKGCLGIICIYQNQILQAMKDLSCVKMRIAVYKEFHYQHTNIPDPISLSPPDCYGTSQLHFGDTYPIYNHFQHTNANEIEVFDGDGVYGNTCIENDDMKPWIHHQPYGNGMINNVNIAMANHQELDILPDYDYIPYDAIADDTQSFIEGKDACESSAESSSKQHIQHVSKNELKNATTACFTLTS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1907 266 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Glsi11g1907 266 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 225 - -
Glsi11g1907 266 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1907 Glsi-ChrGlsi11 11956769 11957661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1907 1 114 AS2 family AT3G47870 55.263 4.32e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi11g1907 LOB 3.2e-36 No_clan